RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 GPC1P35052 558 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 C2orf80Q0P641 193 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 ZNF235Q14590 738 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 FAM187BQ17R55 369 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 CFAP77Q6ZQR2 320 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 KRT74Q7RTS7 529 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 PLEKHH3Q7Z736 793 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 PLCZ1Q86YW0 608 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 ZZZ3Q8IYH5 903 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 STK40Q8N2I9 435 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 C10orf111Q8N326 155 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 PEX13Q92968 403 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 SDHCQ99643 169 aaPredicted RBP9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 TFB2MQ9H5Q4 396 aaKnown RBP9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 C11orf16Q9NQ32 467 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 MGAT4AQ9UM21 535 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 ADAMTS5Q9UNA0 930 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 SSR3Q9UNL2 185 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 MRPS7Q9Y2R9 242 aaKnown RBP9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 PSME4Q14997 1843 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 H3BN98 237 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 TNFRSF11BO00300 401 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 PRKAR1AP10644 381 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 ITGAMP11215 1152 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 KIR2DL3P43628 341 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 SOX9P48436 509 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 CXCR4P61073 352 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 BEX3Q00994 111 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 SPIBQ01892 262 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 USP39Q53GS9 565 aaKnown RBP9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 LUZP2Q86TE4 346 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 CCDC190Q86UF4 302 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 SCN4BQ8IWT1 228 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 GHDCQ8N2G8 530 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 SDR16C5Q8N3Y7 309 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 PGBD5Q8N414 524 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 ZBTB44Q8NCP5 570 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 KIAA1191Q96A73 305 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 C8orf48Q96LL4 319 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 OSMRQ99650 979 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 TM9SF2Q99805 663 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 SAV1Q9H4B6 383 aaPredicted RBP9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 SLC52A3Q9NQ40 469 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 TMEM161AQ9NX61 479 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 SIRT5Q9NXA8 310 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 SLC25A37Q9NYZ2 338 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 ZNF225Q9UK10 706 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 CMAHPQ9Y471 501 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 MYBPHLA2RUH7 354 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 WASHC1A8K0Z3 465 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 FADS2P1A8MWK0 482 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 GPR182O15218 404 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 FABP7O15540 132 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 RGS14O43566 566 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 UGT2B17O75795 530 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 CDK1P06493 297 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 MAP2K3P46734 347 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 GNPDA1P46926 289 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 PRIM2P49643 509 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 CDKN1CP49918 316 aaPredicted RBP9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 RENBPP51606 427 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 ZXDBP98169 803 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 TARDBPQ13148 414 aaKnown RBP eCLIP9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 KEAP1Q14145 624 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 ARHGEF7Q14155 803 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 SIRPB2Q5JXA9 342 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 LDLRAD1Q5T700 205 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 SMYD5Q6GMV2 418 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 CCDC71Q8IV32 467 aaPredicted RBP9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 OR4K2Q8NGD2 314 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 ASB12Q8WXK4 309 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 FUBP1Q96AE4 644 aaKnown RBP9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 OTULINQ96BN8 352 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 SMIM14Q96QK8 99 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 PTPN18Q99952 460 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 MED28Q9H204 178 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 SLAMF7Q9NQ25 335 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 GTF2IRD1Q9UHL9 959 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 NUP50Q9UKX7 468 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 GPX5O75715 221 aa9.47□□□□□ -0.89
TNFAIP3-210ENST00000620204 GLUD1P00367 558 aa9.47□□□□□ -0.89
TNFAIP3-210ENST00000620204 CYP17A1P05093 508 aa9.47□□□□□ -0.89
TNFAIP3-210ENST00000620204 KCNQ1P51787 676 aa9.47□□□□□ -0.89
TNFAIP3-210ENST00000620204 PTPN5P54829 565 aa9.47□□□□□ -0.89
TNFAIP3-210ENST00000620204 DAOAP59103 153 aa9.47□□□□□ -0.89
TNFAIP3-210ENST00000620204 GANABQ14697 944 aaKnown RBP9.47□□□□□ -0.89
TNFAIP3-210ENST00000620204 CCL14Q16627 93 aa9.47□□□□□ -0.89
TNFAIP3-210ENST00000620204 CST9Q5W186 159 aa9.47□□□□□ -0.89
TNFAIP3-210ENST00000620204 C22orf42Q6IC83 251 aa9.47□□□□□ -0.89
TNFAIP3-210ENST00000620204 OR4F3Q6IEY1 312 aa9.47□□□□□ -0.89
TNFAIP3-210ENST00000620204 ZSWIM9Q86XI8 627 aa9.47□□□□□ -0.89
TNFAIP3-210ENST00000620204 B3GNT7Q8NFL0 401 aa9.47□□□□□ -0.89
TNFAIP3-210ENST00000620204 NLGN4YQ8NFZ3 816 aaPredicted RBP9.47□□□□□ -0.89
TNFAIP3-210ENST00000620204 PPP3R2Q96LZ3 170 aa9.47□□□□□ -0.89
TNFAIP3-210ENST00000620204 NKIRAS2Q9NYR9 191 aa9.47□□□□□ -0.89
TNFAIP3-210ENST00000620204 PCTPQ9UKL6 214 aa9.47□□□□□ -0.89
TNFAIP3-210ENST00000620204 LOXHD1Q8IVV2 1947 aa9.47□□□□□ -0.89
TNFAIP3-210ENST00000620204 A0A1B0GVC2 190 aa9.47□□□□□ -0.89
TNFAIP3-210ENST00000620204 A6NIN4 97 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms