RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 MAGEA12P43365 314 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 KCNC1P48547 511 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 PTDSS1P48651 473 aaKnown RBP5.06□□□□□ -1.6
SHMT1-211ENST00000618902 KPNA2P52292 529 aaKnown RBP5.06□□□□□ -1.6
SHMT1-211ENST00000618902 YBX1P67809 324 aaKnown RBP5.06□□□□□ -1.6
SHMT1-211ENST00000618902 HSD11B2P80365 405 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 IRF9Q00978 393 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 VAC14Q08AM6 782 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 FASTKQ14296 549 aaKnown RBP5.06□□□□□ -1.6
SHMT1-211ENST00000618902 C16orf72Q14CZ0 275 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 OR4D1Q15615 310 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 PHKG1Q16816 387 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 SYTL3Q4VX76 610 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 C3orf38Q5JPI3 329 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 SH2D4BQ5SQS7 431 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 TMTC4Q5T4D3 741 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 PHF19Q5T6S3 580 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 FAM45BPQ6NSW5 357 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 ARMC6Q6NXE6 501 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 TTC23LQ6PF05 361 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 INO80CQ6PI98 192 aaPredicted RBP5.06□□□□□ -1.6
SHMT1-211ENST00000618902 UNC5DQ6UXZ4 953 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 NEK10Q6ZWH5 1172 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 TRIM73Q86UV7 250 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 OOSP2Q86WS3 158 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 SPACA3Q8IXA5 215 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 LRRC56Q8IYG6 542 aaPredicted RBP5.06□□□□□ -1.6
SHMT1-211ENST00000618902 TBC1D21Q8IYX1 336 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 SPATA6LQ8N4H0 392 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 ESX1Q8N693 406 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 RCBTB1Q8NDN9 531 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 CATSPER1Q8NEC5 780 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 OR4E2Q8NGC2 313 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 OR5K2Q8NHB8 316 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 RDH11Q8TC12 318 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 FAM45AQ8TCE6 357 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 ASB11Q8WXH4 323 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 NCSTNQ92542 709 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 ISL2Q96A47 359 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 KIAA1143Q96AT1 154 aaPredicted RBP5.06□□□□□ -1.6
SHMT1-211ENST00000618902 PTERQ96BW5 349 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 RNF31Q96EP0 1072 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 LINGO1Q96FE5 620 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 THOC1Q96FV9 657 aaKnown RBP5.06□□□□□ -1.6
SHMT1-211ENST00000618902 SLC41A2Q96JW4 573 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 CCDC74BQ96LY2 380 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 PKP4Q99569 1192 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 SERPINI1Q99574 410 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 GPR87Q9BY21 358 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 PRORYQ9H606 182 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 DENND2DQ9H6A0 471 aaPredicted RBP5.06□□□□□ -1.6
SHMT1-211ENST00000618902 SYNDIG1Q9H7V2 258 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 SYNPO2LQ9H987 977 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 KCNK13Q9HB14 408 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 FANCEQ9HB96 536 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 PDE7BQ9NP56 450 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 NPHS2Q9NP85 383 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 IGSF5Q9NSI5 407 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 ZNF358Q9NW07 568 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 TAS2R1Q9NYW7 299 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 TXNDC16Q9P2K2 825 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 TUBD1Q9UJT1 453 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 KCND3Q9UK17 655 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 SLC39A10Q9ULF5 831 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 ASF1AQ9Y294 204 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 RAXQ9Y2V3 346 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 L3MBTL1Q9Y468 752 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 TMEM184BQ9Y519 407 aaPredicted RBP5.06□□□□□ -1.6
SHMT1-211ENST00000618902 COL12A1Q99715 3063 aa5.06□□□□□ -1.6
SHMT1-211ENST00000618902 NBASA2RRP1 2371 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 FER1L5A0AVI2 2057 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 IGHV5-51A0A0C4DH38 117 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 A0A1W2PPV9 198 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 NPEPPSL1A6NEC2 478 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 A8MU76 341 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 B2RBV5 119 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 TMEM114B3SHH9 223 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 TRIM49D1C9J1S8 452 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 PCDH17O14917 1159 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 HCRTR1O43613 425 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 ZBTB14O43829 449 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 NRP2O60462 931 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 PEX11AO75192 247 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 VPS26AO75436 327 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 RFPL1O75677 317 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 SMNDC1O75940 238 aaKnown RBP eCLIP5.05□□□□□ -1.6
SHMT1-211ENST00000618902 PSMG1O95456 288 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 IGHEP01854 428 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 SERPINE1P05121 402 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 C2P06681 752 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 CTSBP07858 339 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 RPSAP08865 295 aaKnown RBP5.05□□□□□ -1.6
SHMT1-211ENST00000618902 CHRM5P08912 532 aaPredicted RBP5.05□□□□□ -1.6
SHMT1-211ENST00000618902 CCNYL3P0C7X3 344 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 CBSLP0DN79 551 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 MYL2P10916 166 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 ERGP11308 486 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 FGF5P12034 268 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 CCL4P13236 92 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 PVRP15151 417 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms