RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 POMZP3Q6PJE2 187 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 QSOX2Q6ZRP7 698 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 NCCRP1Q6ZVX7 275 aaPredicted RBP4.29□□□□□ -1.72
SNCA-213ENST00000618500 AFAP1L2Q8N4X5 818 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 LILRA3Q8N6C8 439 aaPredicted RBP4.29□□□□□ -1.72
SNCA-213ENST00000618500 STYXQ8WUJ0 223 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 TFB1MQ8WVM0 346 aaKnown RBP4.29□□□□□ -1.72
SNCA-213ENST00000618500 ZNF592Q92610 1267 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 C8orf44Q96CB5 159 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 OXNAD1Q96HP4 312 aaPredicted RBP4.29□□□□□ -1.72
SNCA-213ENST00000618500 ZFP3Q96NJ6 502 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 CYTH2Q99418 400 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 IL1RL2Q9HB29 575 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 FKBPLQ9UIM3 349 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 ADAM21Q9UKJ8 722 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 ASF1AQ9Y294 204 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 TESMINQ9Y4I5 508 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 SCN2AQ99250 2005 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 A0A1B0GTH9 108 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 MROH6A6NGR9 719 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 SAGE2PA6NJ88 616 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 ACOT7O00154 380 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 MYO1CO00159 1063 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 GADD45BO75293 160 aaPredicted RBP4.29□□□□□ -1.72
SNCA-213ENST00000618500 HRGP04196 525 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 POLBP06746 335 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 CELA2AP08217 269 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 OR56A5P0C7T3 313 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 PIRTP0C851 137 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 RPS3P23396 243 aaKnown RBP eCLIP4.29□□□□□ -1.72
SNCA-213ENST00000618500 CYB561P49447 251 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 DMTNQ08495 405 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 DBN1Q16643 649 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 B3GNT6Q6ZMB0 384 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 TRILQ7L0X0 811 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 DET1Q7L5Y6 550 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 GALNTL5Q7Z4T8 443 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 STRA8Q7Z7C7 330 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 FAM109AQ8N4B1 249 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 GOLM1Q8NBJ4 401 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 NFAM1Q8NET5 270 aaPredicted RBP4.29□□□□□ -1.72
SNCA-213ENST00000618500 TMEM125Q96AQ2 219 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 TM4SF19Q96DZ7 209 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 DRC3Q9H069 523 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 KLHL42Q9P2K6 505 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 LPAR3Q9UBY5 353 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 SH3BGRL2Q9UJC5 107 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 ANAPC7Q9UJX3 599 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 NFS1Q9Y697 457 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 SOWAHDA6NJG2 315 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 CLCA1A8K7I4 914 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 KCNK1O00180 336 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 CES2O00748 559 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 PSMD3O43242 534 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 PEX1O43933 1283 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 WISP2O76076 250 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 ERVK-10P10266 1014 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 NFKB1P19838 968 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 SLC1A1P43005 524 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 VSX2P58304 361 aaPredicted RBP4.29□□□□□ -1.72
SNCA-213ENST00000618500 TFDP2Q14188 446 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 PCSK7Q16549 785 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 DPCR1Q3MIW9 517 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 TFDP3Q5H9I0 405 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 Q5PR19 223 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 FRMPD2BQ6IN97 320 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 RETREG3Q86VR2 466 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 SERPINA9Q86WD7 417 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 LACC1Q8IV20 430 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 ZZZ3Q8IYH5 903 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 MPP5Q8N3R9 675 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 CSNK1A1LQ8N752 337 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 CCNYQ8ND76 341 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 OR4K2Q8NGD2 314 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 OR2A1Q8NGT9 310 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 SPATA22Q8NHS9 363 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 CABS1Q96KC9 395 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 OR2A5Q96R48 311 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 HAUS4Q9H6D7 363 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 TIMMDC1Q9NPL8 285 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 LANCL2Q9NS86 450 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 ZNF701Q9NV72 531 aaPredicted RBP4.29□□□□□ -1.72
SNCA-213ENST00000618500 IRAK4Q9NWZ3 460 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 ADGRE2Q9UHX3 823 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 RUVBL1Q9Y265 456 aaKnown RBP4.29□□□□□ -1.72
SNCA-213ENST00000618500 SLC22A7Q9Y694 548 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 IGKV3D-11A0A0A0MRZ8 115 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 FAM227AF5H4B4 570 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 H0YGG7 62 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 MYO1FO00160 1098 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 LCE2BO14633 110 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 SMPD2O60906 423 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 MCM3P25205 808 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 HADHBP55084 474 aaKnown RBP4.28□□□□□ -1.72
SNCA-213ENST00000618500 FOXL2P58012 376 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 ARF3P61204 181 aaPredicted RBP4.28□□□□□ -1.72
SNCA-213ENST00000618500 TMED2Q15363 201 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 ETFDHQ16134 617 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 SYTL3Q4VX76 610 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 NHSL2Q5HYW2 709 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms