RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CD6P30203 668 aa9.15□□□□□ -0.95
CLTCL1-208ENST00000615606 RAB28P51157 221 aa9.15□□□□□ -0.95
CLTCL1-208ENST00000615606 TBPL1P62380 186 aa9.15□□□□□ -0.95
CLTCL1-208ENST00000615606 HHEXQ03014 270 aa9.15□□□□□ -0.95
CLTCL1-208ENST00000615606 SCARB2Q14108 478 aa9.15□□□□□ -0.95
CLTCL1-208ENST00000615606 LRP8Q14114 963 aa9.15□□□□□ -0.95
CLTCL1-208ENST00000615606 PTCHD4Q6ZW05 846 aa9.15□□□□□ -0.95
CLTCL1-208ENST00000615606 PIGWQ7Z7B1 504 aa9.15□□□□□ -0.95
CLTCL1-208ENST00000615606 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.15□□□□□ -0.95
CLTCL1-208ENST00000615606 PLD6Q8N2A8 252 aaKnown RBP9.15□□□□□ -0.95
CLTCL1-208ENST00000615606 KCT2Q8NC54 265 aa9.15□□□□□ -0.95
CLTCL1-208ENST00000615606 ATP6V1C2Q8NEY4 427 aa9.15□□□□□ -0.95
CLTCL1-208ENST00000615606 RBM4BQ9BQ04 359 aaKnown RBP9.15□□□□□ -0.95
CLTCL1-208ENST00000615606 RBM4Q9BWF3 364 aaKnown RBP9.15□□□□□ -0.95
CLTCL1-208ENST00000615606 CCNB1IP1Q9NPC3 277 aa9.15□□□□□ -0.95
CLTCL1-208ENST00000615606 IL26Q9NPH9 171 aa9.15□□□□□ -0.95
CLTCL1-208ENST00000615606 MKS1Q9NXB0 559 aa9.15□□□□□ -0.95
CLTCL1-208ENST00000615606 WNK3Q9BYP7 1800 aa9.15□□□□□ -0.95
CLTCL1-208ENST00000615606 SMIM31A0A1B0GVY4 71 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 FAM25AB3EWG3 89 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 FAM25CB3EWG5 89 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 FAM25GB3EWG6 89 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 HHLA1C9JL84 531 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 CLIC1O00299 241 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 ASGR2P07307 311 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 TIMP2P16035 220 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 IL4RP24394 825 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 CTGFP29279 349 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 MAPK10P53779 464 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 MTPNP58546 118 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 CCINQ13939 588 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 LACTB2Q53H82 288 aaPredicted RBP9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 TMEM198Q66K66 360 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 FGD2Q7Z6J4 655 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 TMEM156Q8N614 296 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 GPR150Q8NGU9 434 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 MR1Q95460 341 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 DTD2Q96FN9 168 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 ZNF347Q96SE7 839 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 S100A14Q9HCY8 104 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 IL1RAPQ9NPH3 570 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 PAPOLBQ9NRJ5 636 aaKnown RBP9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 DKK3Q9UBP4 350 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 DMTF1Q9Y222 760 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 U3KQV3 271 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 TMEM233B4DJY2 109 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 GMFGO60234 142 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 ALDOAP04075 364 aaKnown RBP9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 HEXBP07686 556 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 SLC35E2BP0CK96 405 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 CCNA2P20248 432 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 AGTR2P50052 363 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 ARF5P84085 180 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 MLF2Q15773 248 aaPredicted RBP9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 MANEALQ5VSG8 457 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 BROXQ5VW32 411 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 LIPIQ6XZB0 460 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 Q6ZSR6 202 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 SFRP1Q8N474 314 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 PLA2G15Q8NCC3 412 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 ZNF540Q8NDQ6 660 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 FAM174AQ8TBP5 190 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 AGAP11Q8TF27 550 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 MMABQ96EY8 250 aaPredicted RBP9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 ZNF354BQ96LW1 612 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 ZNF778Q96MU6 729 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 C17orf62Q9BQA9 187 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 SERINC1Q9NRX5 453 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 GPRC5BQ9NZH0 403 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 HS3ST2Q9Y278 367 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 TLX3O43711 291 aaPredicted RBP9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 CACNG3O60359 315 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 GRK6P43250 576 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 PTDSS1P48651 473 aaKnown RBP9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 CDKN2DP55273 166 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 NFE2L1Q14494 772 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 DECR1Q16698 335 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 PDCD4Q53EL6 469 aaKnown RBP9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 NRROSQ86YC3 692 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 TICAM1Q8IUC6 712 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 RBM12BQ8IXT5 1001 aaKnown RBP9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 MOSPD2Q8NHP6 518 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 CLPTM1LQ96KA5 538 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 DPH7Q9BTV6 452 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 CFHR5Q9BXR6 569 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 SDHAF3Q9NRP4 125 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 ECM29Q5VYK3 1845 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 MUSKO15146 869 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 CCNB2O95067 398 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 JUNP05412 331 aaKnown RBP9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 CD72P21854 359 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 CTSKP43235 329 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 TRAF7Q6Q0C0 670 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 EPGNQ6UW88 154 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 NUP54Q7Z3B4 507 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 FAM13CQ8NE31 585 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 LINC01599Q8WXQ3 324 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 MTERF3Q96E29 417 aa9.14□□□□□ -0.95
CLTCL1-208ENST00000615606 OR52B2Q96RD2 323 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms