RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 UGT3A2Q3SY77 523 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 C9orf64Q5T6V5 341 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 METTL2BQ6P1Q9 378 aaKnown RBP12.68□□□□□ -0.38
FOXN3-219ENST00000615335 GDPD4Q6W3E5 623 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 FUNDC1Q8IVP5 155 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 DDIASQ8IXT1 998 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 DYNC2LI1Q8TCX1 351 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 HDAC2Q92769 488 aaKnown RBP12.68□□□□□ -0.38
FOXN3-219ENST00000615335 GLMNQ92990 594 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 PTERQ96BW5 349 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 AKTIPQ9H8T0 292 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 SCPEP1Q9HB40 452 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 CRYL1Q9Y2S2 319 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 MUC22E2RYF6 1773 aaPredicted RBP12.67□□□□□ -0.38
FOXN3-219ENST00000615335 NPC1O15118 1278 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 FZD6O60353 706 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 CTSLP07711 333 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 ALDOCP09972 364 aaKnown RBP12.67□□□□□ -0.38
FOXN3-219ENST00000615335 CRHBPP24387 322 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 ETV1P50549 477 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 CDH13P55290 713 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 TOP3AQ13472 1001 aaPredicted RBP12.67□□□□□ -0.38
FOXN3-219ENST00000615335 SDE2Q6IQ49 451 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 ZNF767PQ75MW2 155 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 RAB44Q7Z6P3 723 aaPredicted RBP12.67□□□□□ -0.38
FOXN3-219ENST00000615335 UBQLNLQ8IYU4 475 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 STK40Q8N2I9 435 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 OR8D1Q8WZ84 308 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 VOPP1Q96AW1 172 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 MSANTD3Q96H12 275 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 OAZ3Q9UMX2 235 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 NDRG2Q9UN36 371 aaKnown RBP12.67□□□□□ -0.38
FOXN3-219ENST00000615335 KCTD3Q9Y597 815 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 A0A0G2JMP0 313 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 A0A0J9YYE9 177 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 DHRS12A0PJE2 317 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 NR5A2O00482 541 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 EI24O14681 340 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 SGTAO43765 313 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 NDUFS2O75306 463 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 SLITRK5O94991 958 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 CD1DP15813 335 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 SPNP16150 400 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 FDXRP22570 491 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 SH3BP2P78314 561 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 POU6F2P78424 691 aaPredicted RBP12.67□□□□□ -0.38
FOXN3-219ENST00000615335 ELAVL3Q14576 367 aaKnown RBP12.67□□□□□ -0.38
FOXN3-219ENST00000615335 MLF2Q15773 248 aaPredicted RBP12.67□□□□□ -0.38
FOXN3-219ENST00000615335 PLA2G4EQ3MJ16 856 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 POM121L1PQ3SYA9 428 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 RETREG3Q86VR2 466 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 GATAD2AQ86YP4 633 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 PTGR2Q8N8N7 351 aaPredicted RBP12.67□□□□□ -0.38
FOXN3-219ENST00000615335 LRRC20Q8TCA0 184 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 SMIM14Q96QK8 99 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 TIGARQ9NQ88 270 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 ATP6V1HQ9UI12 483 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 FBXL21Q9UKT6 434 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 NDUFAF1Q9Y375 327 aa12.67□□□□□ -0.38
FOXN3-219ENST00000615335 ATP6V1G2-DDX39BF2Z307 99 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 MAN2B1O00754 1011 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 DBTP11182 482 aaKnown RBP12.66□□□□□ -0.38
FOXN3-219ENST00000615335 CTPS1P17812 591 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 PLCL1Q15111 1095 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 PNCKQ6P2M8 343 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 PRMT9Q6P2P2 845 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 XKRXQ6PP77 449 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 ZNF852Q6ZMS4 543 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 PIH1D2Q8WWB5 315 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 LRIG1Q96JA1 1093 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 ST6GAL2Q96JF0 529 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 TBATAQ96M53 351 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 HOPXQ9BPY8 73 aaPredicted RBP12.66□□□□□ -0.38
FOXN3-219ENST00000615335 ASPSCR1Q9BZE9 553 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 IL1RL2Q9HB29 575 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 MID1IP1Q9NPA3 183 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 PRSS16Q9NQE7 514 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 INTS10Q9NVR2 710 aaKnown RBP12.66□□□□□ -0.38
FOXN3-219ENST00000615335 GMPR2Q9P2T1 348 aaKnown RBP12.66□□□□□ -0.38
FOXN3-219ENST00000615335 HCN4Q9Y3Q4 1203 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 DNAJC15Q9Y5T4 150 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 SHISA7A6NL88 538 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 PLK4O00444 970 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 KPNA3O00505 521 aaPredicted RBP12.66□□□□□ -0.38
FOXN3-219ENST00000615335 ARHGEF9O43307 516 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 TBX1O43435 398 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 LDB2O43679 373 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 CDK14O94921 469 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 PRNPP04156 253 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 FGF4P08620 206 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 ALPIP09923 528 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 ATP6V1B2P21281 511 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 NTSR1P30989 418 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 POLR2LP62875 67 aaKnown RBP12.66□□□□□ -0.38
FOXN3-219ENST00000615335 PTPRRQ15256 657 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 SHEQ5VZ18 495 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 ZNF549Q6P9A3 640 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 VN1R5Q7Z5H4 357 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 THAP5Q7Z6K1 395 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 NOXA1Q86UR1 476 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms