RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 EPHX3Q9H6B9 360 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 RPF2Q9H7B2 306 aaKnown RBP3.31□□□□□ -1.88
LIG4-205ENST00000614526 PRDM6Q9NQX0 595 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 SPHK1Q9NYA1 384 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 SUCOQ9UBS9 1254 aaKnown RBP3.31□□□□□ -1.88
LIG4-205ENST00000614526 TBC1D29Q9UFV1 150 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 UTS2RQ9UKP6 389 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 PCDHGB4Q9UN71 923 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 DTNAQ9Y4J8 743 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 PCDHGB5Q9Y5G0 923 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 PCDHGA11Q9Y5H2 935 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 ABCA7Q8IZY2 2146 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 TDRD6O60522 2096 aaKnown RBP3.31□□□□□ -1.88
LIG4-205ENST00000614526 C17orf113A0A1B0GUU1 675 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 DHRS12A0PJE2 317 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 GLOD5A6NK44 160 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 SHISA7A6NL88 538 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 GABRR3A8MPY1 467 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 ISM1B1AKI9 464 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 MBTPS2O43462 519 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 PI15O43692 258 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 PCDH7O60245 1069 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 LCMT2O60294 686 aaKnown RBP3.31□□□□□ -1.88
LIG4-205ENST00000614526 PRAMEF10O60809 474 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 PIM1P11309 404 aaPredicted RBP3.31□□□□□ -1.88
LIG4-205ENST00000614526 IL9P15248 144 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 ATP6V1C1P21283 382 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 DRD1P21728 446 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 IDSP22304 550 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 KELP23276 732 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 JAK1P23458 1154 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 KIR3DL1P43629 444 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 CLDN8P56748 225 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 TAS2R50P59544 299 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 RAE1P78406 368 aaKnown RBP3.31□□□□□ -1.88
LIG4-205ENST00000614526 CTBSQ01459 385 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 RHDQ02161 417 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 CYP4F3Q08477 520 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 MAD2L1Q13257 205 aaPredicted RBP3.31□□□□□ -1.88
LIG4-205ENST00000614526 PWP1Q13610 501 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 HIST2H2ACQ16777 129 aaPredicted RBP3.31□□□□□ -1.88
LIG4-205ENST00000614526 UGT8Q16880 541 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 PYCR3Q53H96 274 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 C6orf52Q5T4I8 152 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 HIST2H2AA3Q6FI13 130 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 GRHL2Q6ISB3 625 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 NXPE4Q6UWF7 544 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 TMIGD1Q6UXZ0 262 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 TRIM73Q86UV7 250 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 FAM129CQ86XR2 697 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 DCUN1D3Q8IWE4 304 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 DTWD1Q8N5C7 304 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 KIAA1958Q8N8K9 716 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 AMER3Q8N944 861 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 OR2T34Q8NGX1 318 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 OR10G6Q8NH81 332 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 OR5AK3PQ8NH89 298 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 STON2Q8WXE9 905 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 CIDECQ96AQ7 238 aaPredicted RBP3.31□□□□□ -1.88
LIG4-205ENST00000614526 RNF31Q96EP0 1072 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 TOE1Q96GM8 510 aaKnown RBP3.31□□□□□ -1.88
LIG4-205ENST00000614526 ANKRD27Q96NW4 1050 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 SLC29A1Q99808 456 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 ABCG4Q9H172 646 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 TRIT1Q9H3H1 467 aaKnown RBP3.31□□□□□ -1.88
LIG4-205ENST00000614526 DPEP2Q9H4A9 486 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 CLMPQ9H6B4 373 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 UBE2ZQ9H832 354 aaPredicted RBP3.31□□□□□ -1.88
LIG4-205ENST00000614526 COQ10BQ9H8M1 238 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 LMAN1LQ9HAT1 526 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 THEGQ9P2T0 379 aa3.31□□□□□ -1.88
LIG4-205ENST00000614526 MAGED1Q9Y5V3 778 aaPredicted RBP3.31□□□□□ -1.88
LIG4-205ENST00000614526 DMDP11532 3685 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 PRSS38A1L453 326 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 ANKDD1BA6NHY2 528 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 FPGTO14772 594 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 AP1G1O43747 822 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 PRKRAO75569 313 aaKnown RBP3.3□□□□□ -1.88
LIG4-205ENST00000614526 MYO1DO94832 1006 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 IL6P05231 212 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 CELA2BP08218 269 aaPredicted RBP3.3□□□□□ -1.88
LIG4-205ENST00000614526 NUDT7P0C024 238 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 ALPPL2P10696 532 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 HRH2P25021 359 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 IST1P53990 364 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 C2orf80Q0P641 193 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 GAS6Q14393 721 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 LRRC23Q53EV4 343 aaPredicted RBP3.3□□□□□ -1.88
LIG4-205ENST00000614526 CDKL4Q5MAI5 379 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 OTUD3Q5T2D3 398 aaPredicted RBP3.3□□□□□ -1.88
LIG4-205ENST00000614526 HMBOX1Q6NT76 420 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 ZCCHC8Q6NZY4 707 aaKnown RBP3.3□□□□□ -1.88
LIG4-205ENST00000614526 TLDC1Q6P9B6 456 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 ENPP6Q6UWR7 440 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 Q6ZSR6 202 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 SZRD1Q7Z422 152 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 COMMD6Q7Z4G1 85 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 LSRQ86X29 649 aaPredicted RBP3.3□□□□□ -1.88
LIG4-205ENST00000614526 RASGRP3Q8IV61 690 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 ANKRD53Q8N9V6 530 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms