RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 MAPKAPK3Q16644 382 aa16.4■□□□□ 0.22
CHMP4A-211ENST00000609024 SUSD1Q6UWL2 747 aa16.4■□□□□ 0.22
CHMP4A-211ENST00000609024 C3P1Q6ZMU1 363 aa16.4■□□□□ 0.22
CHMP4A-211ENST00000609024 GALNTL5Q7Z4T8 443 aa16.4■□□□□ 0.22
CHMP4A-211ENST00000609024 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.4■□□□□ 0.22
CHMP4A-211ENST00000609024 LRRC6Q86X45 466 aa16.4■□□□□ 0.22
CHMP4A-211ENST00000609024 MDS2Q8NDY4 140 aa16.4■□□□□ 0.22
CHMP4A-211ENST00000609024 OR9A1PQ8NGU1 263 aa16.4■□□□□ 0.22
CHMP4A-211ENST00000609024 CYTH2Q99418 400 aa16.4■□□□□ 0.22
CHMP4A-211ENST00000609024 HES7Q9BYE0 225 aa16.4■□□□□ 0.22
CHMP4A-211ENST00000609024 VN1R1Q9GZP7 353 aa16.4■□□□□ 0.22
CHMP4A-211ENST00000609024 FAM114A2Q9NRY5 505 aa16.4■□□□□ 0.22
CHMP4A-211ENST00000609024 ABCF3Q9NUQ8 709 aa16.4■□□□□ 0.22
CHMP4A-211ENST00000609024 PCYOX1Q9UHG3 505 aa16.4■□□□□ 0.22
CHMP4A-211ENST00000609024 A0A1W2PPV9 198 aa16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 KRT87PA6NCN2 255 aa16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 ASPDHA6ND91 283 aa16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 PFDN6O15212 129 aa16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 CD3EAPO15446 510 aaKnown RBP16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 FOXS1O43638 330 aa16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 CD99P14209 185 aa16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 HSD17B2P37059 387 aa16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 EIF3BP55884 814 aaKnown RBP16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 YBX1P67809 324 aaKnown RBP16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 PTK6Q13882 451 aa16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 SEMA3AQ14563 771 aa16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 MEI1Q5TIA1 1274 aa16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 SLC25A25Q6KCM7 469 aa16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 LANCL3Q6ZV70 420 aa16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 ZNF534Q76KX8 674 aa16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 PAQR7Q86WK9 346 aa16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 DOLPP1Q86YN1 238 aa16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 CRLF3Q8IUI8 442 aa16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 PEX13Q92968 403 aa16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 SCMH1Q96GD3 660 aa16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 FRMD6Q96NE9 622 aa16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 EBNA1BP2Q99848 306 aaKnown RBP16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 TMEM121Q9BTD3 319 aa16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 TAC3Q9UHF0 121 aa16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 TFR2Q9UP52 801 aa16.39■□□□□ 0.21
CHMP4A-211ENST00000609024 GABRR3A8MPY1 467 aa16.38■□□□□ 0.21
CHMP4A-211ENST00000609024 H0YIG0 161 aa16.38■□□□□ 0.21
CHMP4A-211ENST00000609024 IPO7O95373 1038 aaKnown RBP16.38■□□□□ 0.21
CHMP4A-211ENST00000609024 SP1P08047 785 aa16.38■□□□□ 0.21
CHMP4A-211ENST00000609024 HSF1Q00613 529 aa16.38■□□□□ 0.21
CHMP4A-211ENST00000609024 THEMIS2Q5TEJ8 643 aa16.38■□□□□ 0.21
CHMP4A-211ENST00000609024 ICE2Q659A1 982 aa16.38■□□□□ 0.21
CHMP4A-211ENST00000609024 AADACL2Q6P093 401 aa16.38■□□□□ 0.21
CHMP4A-211ENST00000609024 M1APQ8TC57 530 aa16.38■□□□□ 0.21
CHMP4A-211ENST00000609024 ASB5Q8WWX0 329 aa16.38■□□□□ 0.21
CHMP4A-211ENST00000609024 ZNF778Q96MU6 729 aa16.38■□□□□ 0.21
CHMP4A-211ENST00000609024 OR2A5Q96R48 311 aa16.38■□□□□ 0.21
CHMP4A-211ENST00000609024 ZNF559Q9BR84 538 aa16.38■□□□□ 0.21
CHMP4A-211ENST00000609024 LRFN1Q9P244 771 aa16.38■□□□□ 0.21
CHMP4A-211ENST00000609024 TCAF1Q9Y4C2 921 aa16.38■□□□□ 0.21
CHMP4A-211ENST00000609024 A0A0U1RQJ8 604 aa16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 CATP04040 527 aaKnown RBP16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 TPOP07202 933 aa16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 CYLC1P35663 651 aaPredicted RBP16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 FDFT1P37268 417 aa16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 ST13P50502 369 aaKnown RBP16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 GDF10P55107 478 aa16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 ABATP80404 500 aa16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 ACVR1Q04771 509 aa16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 PRDX1Q06830 199 aaKnown RBP16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 ARHGAP19Q14CB8 494 aa16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 CES4AQ5XG92 561 aa16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 TMEM211Q6ICI0 200 aa16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 H3F3CQ6NXT2 135 aa16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 CEP128Q6ZU80 1094 aa16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 SDCCAG8Q86SQ7 713 aaPredicted RBP16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 MPP5Q8N3R9 675 aa16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 UBL4BQ8N7F7 174 aa16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 AMER2Q8N7J2 671 aa16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 CHDHQ8NE62 594 aaPredicted RBP16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 OR9A4Q8NGU2 314 aa16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 OR51Q1Q8NH59 317 aa16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 TMEM125Q96AQ2 219 aa16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 LPAR4Q99677 370 aa16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 R3HDM2Q9Y2K5 976 aaKnown RBP16.37■□□□□ 0.21
CHMP4A-211ENST00000609024 USP27XA6NNY8 438 aa16.36■□□□□ 0.21
CHMP4A-211ENST00000609024 NDC80O14777 642 aa16.36■□□□□ 0.21
CHMP4A-211ENST00000609024 NSA2O95478 260 aaKnown RBP16.36■□□□□ 0.21
CHMP4A-211ENST00000609024 PTGS2P35354 604 aa16.36■□□□□ 0.21
CHMP4A-211ENST00000609024 XCR1P46094 333 aa16.36■□□□□ 0.21
CHMP4A-211ENST00000609024 PNLIPRP1P54315 467 aa16.36■□□□□ 0.21
CHMP4A-211ENST00000609024 PPP2R2AP63151 447 aa16.36■□□□□ 0.21
CHMP4A-211ENST00000609024 ANKRD37Q7Z713 158 aa16.36■□□□□ 0.21
CHMP4A-211ENST00000609024 PANX2Q96RD6 677 aa16.36■□□□□ 0.21
CHMP4A-211ENST00000609024 DMRTA2Q96SC8 542 aa16.36■□□□□ 0.21
CHMP4A-211ENST00000609024 TRIM51Q9BSJ1 452 aa16.36■□□□□ 0.21
CHMP4A-211ENST00000609024 P2RY12Q9H244 342 aa16.36■□□□□ 0.21
CHMP4A-211ENST00000609024 ETNK1Q9HBU6 452 aa16.36■□□□□ 0.21
CHMP4A-211ENST00000609024 SLC24A3Q9HC58 644 aa16.36■□□□□ 0.21
CHMP4A-211ENST00000609024 MMP25Q9NPA2 562 aa16.36■□□□□ 0.21
CHMP4A-211ENST00000609024 KCNJ16Q9NPI9 418 aa16.36■□□□□ 0.21
CHMP4A-211ENST00000609024 HCN3Q9P1Z3 774 aa16.36■□□□□ 0.21
CHMP4A-211ENST00000609024 SCN2AQ99250 2005 aa16.36■□□□□ 0.21
CHMP4A-211ENST00000609024 H3BMM5 538 aa16.35■□□□□ 0.21
CHMP4A-211ENST00000609024 SMAPO00193 183 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms