RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 GFYI3L273 518 aa18.35■□□□□ 0.53
SGMS1-208ENST00000608287 ERGP11308 486 aa18.35■□□□□ 0.53
SGMS1-208ENST00000608287 RPA3P35244 121 aaPredicted RBP18.35■□□□□ 0.53
SGMS1-208ENST00000608287 HSD17B2P37059 387 aa18.35■□□□□ 0.53
SGMS1-208ENST00000608287 GRIA3P42263 894 aa18.35■□□□□ 0.53
SGMS1-208ENST00000608287 PNLIPRP1P54315 467 aa18.35■□□□□ 0.53
SGMS1-208ENST00000608287 PLTPP55058 493 aa18.35■□□□□ 0.53
SGMS1-208ENST00000608287 CBLBQ13191 982 aa18.35■□□□□ 0.53
SGMS1-208ENST00000608287 PDAP1Q13442 181 aaKnown RBP18.35■□□□□ 0.53
SGMS1-208ENST00000608287 ARHGAP19Q14CB8 494 aa18.35■□□□□ 0.53
SGMS1-208ENST00000608287 ZNF630Q2M218 657 aaPredicted RBP18.35■□□□□ 0.53
SGMS1-208ENST00000608287 PTCHD3Q3KNS1 767 aa18.35■□□□□ 0.53
SGMS1-208ENST00000608287 HECTD2Q5U5R9 776 aa18.35■□□□□ 0.53
SGMS1-208ENST00000608287 FAM69BQ5VUD6 431 aa18.35■□□□□ 0.53
SGMS1-208ENST00000608287 AGAP7PQ5VUJ5 663 aa18.35■□□□□ 0.53
SGMS1-208ENST00000608287 SUSD1Q6UWL2 747 aa18.35■□□□□ 0.53
SGMS1-208ENST00000608287 MYO1HQ8N1T3 1032 aa18.35■□□□□ 0.53
SGMS1-208ENST00000608287 FBXO15Q8NCQ5 510 aaPredicted RBP18.35■□□□□ 0.53
SGMS1-208ENST00000608287 OR2L3Q8NG85 312 aa18.35■□□□□ 0.53
SGMS1-208ENST00000608287 OR2A1Q8NGT9 310 aa18.35■□□□□ 0.53
SGMS1-208ENST00000608287 DNAJB14Q8TBM8 379 aa18.35■□□□□ 0.53
SGMS1-208ENST00000608287 SMPDL3AQ92484 453 aa18.35■□□□□ 0.53
SGMS1-208ENST00000608287 AGAP4Q96P64 663 aa18.35■□□□□ 0.53
SGMS1-208ENST00000608287 SLX1AQ9BQ83 275 aa18.35■□□□□ 0.53
SGMS1-208ENST00000608287 EURLQ9NYK6 297 aa18.35■□□□□ 0.53
SGMS1-208ENST00000608287 MOCS1Q9NZB8 636 aa18.35■□□□□ 0.53
SGMS1-208ENST00000608287 NDOR1Q9UHB4 597 aa18.35■□□□□ 0.53
SGMS1-208ENST00000608287 AP1M2Q9Y6Q5 423 aa18.35■□□□□ 0.53
SGMS1-208ENST00000608287 MYO7BQ6PIF6 2116 aa18.34■□□□□ 0.53
SGMS1-208ENST00000608287 ZNF839A8K0R7 811 aa18.34■□□□□ 0.53
SGMS1-208ENST00000608287 TARM1B6A8C7 271 aa18.34■□□□□ 0.53
SGMS1-208ENST00000608287 EIF3HO15372 352 aaKnown RBP eCLIP18.34■□□□□ 0.53
SGMS1-208ENST00000608287 ZSCAN9O15535 394 aaPredicted RBP18.34■□□□□ 0.53
SGMS1-208ENST00000608287 KLF7O75840 302 aaPredicted RBP18.34■□□□□ 0.53
SGMS1-208ENST00000608287 SLC16A8O95907 504 aa18.34■□□□□ 0.53
SGMS1-208ENST00000608287 CTSBP07858 339 aa18.34■□□□□ 0.53
SGMS1-208ENST00000608287 HTR1EP28566 365 aa18.34■□□□□ 0.53
SGMS1-208ENST00000608287 CMPK1P30085 196 aa18.34■□□□□ 0.53
SGMS1-208ENST00000608287 CAV1Q03135 178 aa18.34■□□□□ 0.53
SGMS1-208ENST00000608287 WHAMMP3Q1A5X7 153 aa18.34■□□□□ 0.53
SGMS1-208ENST00000608287 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.34■□□□□ 0.53
SGMS1-208ENST00000608287 ZC3H12BQ5HYM0 836 aaKnown RBP18.34■□□□□ 0.53
SGMS1-208ENST00000608287 FAM45BPQ6NSW5 357 aa18.34■□□□□ 0.53
SGMS1-208ENST00000608287 C8orf74Q6P047 294 aa18.34■□□□□ 0.53
SGMS1-208ENST00000608287 STRA8Q7Z7C7 330 aa18.34■□□□□ 0.53
SGMS1-208ENST00000608287 MCATQ8IVS2 390 aaKnown RBP18.34■□□□□ 0.53
SGMS1-208ENST00000608287 ZNF655Q8N720 491 aaPredicted RBP18.34■□□□□ 0.53
SGMS1-208ENST00000608287 PPFIBP2Q8ND30 876 aa18.34■□□□□ 0.53
SGMS1-208ENST00000608287 OR2Y1Q8NGV0 311 aa18.34■□□□□ 0.53
SGMS1-208ENST00000608287 FAM45AQ8TCE6 357 aa18.34■□□□□ 0.53
SGMS1-208ENST00000608287 ZNF480Q8WV37 535 aa18.34■□□□□ 0.53
SGMS1-208ENST00000608287 ZUFSPQ96AP4 578 aa18.34■□□□□ 0.53
SGMS1-208ENST00000608287 PTERQ96BW5 349 aa18.34■□□□□ 0.53
SGMS1-208ENST00000608287 LINGO1Q96FE5 620 aa18.34■□□□□ 0.53
SGMS1-208ENST00000608287 VPS50Q96JG6 964 aa18.34■□□□□ 0.53
SGMS1-208ENST00000608287 ABCF3Q9NUQ8 709 aa18.34■□□□□ 0.53
SGMS1-208ENST00000608287 VWA7Q9Y334 891 aa18.34■□□□□ 0.53
SGMS1-208ENST00000608287 PTRH2Q9Y3E5 179 aaKnown RBP18.34■□□□□ 0.53
SGMS1-208ENST00000608287 PSAT1Q9Y617 370 aa18.34■□□□□ 0.53
SGMS1-208ENST00000608287 NF1P21359 2839 aa18.34■□□□□ 0.53
SGMS1-208ENST00000608287 CNTRLQ7Z7A1 2325 aa18.33■□□□□ 0.53
SGMS1-208ENST00000608287 H3BMH7 237 aa18.33■□□□□ 0.52
SGMS1-208ENST00000608287 JRKO75564 520 aa18.33■□□□□ 0.52
SGMS1-208ENST00000608287 SAT1P21673 171 aa18.33■□□□□ 0.52
SGMS1-208ENST00000608287 SSTR1P30872 391 aa18.33■□□□□ 0.52
SGMS1-208ENST00000608287 PGGT1BP53609 377 aa18.33■□□□□ 0.52
SGMS1-208ENST00000608287 SLC7A5Q01650 507 aa18.33■□□□□ 0.52
SGMS1-208ENST00000608287 TESK1Q15569 626 aa18.33■□□□□ 0.52
SGMS1-208ENST00000608287 RPUSD3Q6P087 351 aaKnown RBP18.33■□□□□ 0.52
SGMS1-208ENST00000608287 TLDC1Q6P9B6 456 aa18.33■□□□□ 0.52
SGMS1-208ENST00000608287 SLC26A11Q86WA9 606 aa18.33■□□□□ 0.52
SGMS1-208ENST00000608287 CCDC25Q86WR0 208 aa18.33■□□□□ 0.52
SGMS1-208ENST00000608287 FBXO25Q8TCJ0 367 aa18.33■□□□□ 0.52
SGMS1-208ENST00000608287 PROKR1Q8TCW9 393 aa18.33■□□□□ 0.52
SGMS1-208ENST00000608287 ITLN2Q8WWU7 325 aaPredicted RBP18.33■□□□□ 0.52
SGMS1-208ENST00000608287 TRIM44Q96DX7 344 aaPredicted RBP18.33■□□□□ 0.52
SGMS1-208ENST00000608287 OLFM1Q99784 485 aa18.33■□□□□ 0.52
SGMS1-208ENST00000608287 NSMCE4AQ9NXX6 385 aa18.33■□□□□ 0.52
SGMS1-208ENST00000608287 ADAMTS6Q9UKP5 1117 aa18.33■□□□□ 0.52
SGMS1-208ENST00000608287 AGPSO00116 658 aa18.32■□□□□ 0.52
SGMS1-208ENST00000608287 C8GP07360 202 aa18.32■□□□□ 0.52
SGMS1-208ENST00000608287 ATXN8OSP0DMR3 200 aa18.32■□□□□ 0.52
SGMS1-208ENST00000608287 FDXRP22570 491 aa18.32■□□□□ 0.52
SGMS1-208ENST00000608287 IL2P60568 153 aa18.32■□□□□ 0.52
SGMS1-208ENST00000608287 YBX1P67809 324 aaKnown RBP18.32■□□□□ 0.52
SGMS1-208ENST00000608287 TRADDQ15628 312 aa18.32■□□□□ 0.52
SGMS1-208ENST00000608287 C1orf189Q5VU69 101 aa18.32■□□□□ 0.52
SGMS1-208ENST00000608287 MLIPQ5VWP3 458 aa18.32■□□□□ 0.52
SGMS1-208ENST00000608287 RHBDD2Q6NTF9 364 aa18.32■□□□□ 0.52
SGMS1-208ENST00000608287 IGFL2Q6UWQ7 119 aa18.32■□□□□ 0.52
SGMS1-208ENST00000608287 MCOLN3Q8TDD5 553 aa18.32■□□□□ 0.52
SGMS1-208ENST00000608287 CNDP1Q96KN2 507 aa18.32■□□□□ 0.52
SGMS1-208ENST00000608287 SELENOSQ9BQE4 189 aa18.32■□□□□ 0.52
SGMS1-208ENST00000608287 LRRC1Q9BTT6 524 aa18.32■□□□□ 0.52
SGMS1-208ENST00000608287 DPH7Q9BTV6 452 aa18.32■□□□□ 0.52
SGMS1-208ENST00000608287 NDC1Q9BTX1 674 aa18.32■□□□□ 0.52
SGMS1-208ENST00000608287 TRIM8Q9BZR9 551 aa18.32■□□□□ 0.52
SGMS1-208ENST00000608287 MRPS30Q9NP92 439 aaKnown RBP18.32■□□□□ 0.52
SGMS1-208ENST00000608287 TXLNGQ9NUQ3 528 aa18.32■□□□□ 0.52
SGMS1-208ENST00000608287 DHCR7Q9UBM7 475 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms