RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 MLIPQ5VWP3 458 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 VN1R4Q7Z5H5 301 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 TMEM151BQ8IW70 566 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 PLD6Q8N2A8 252 aaKnown RBP14.52□□□□□ -0.09
LIG1-219ENST00000600055 CSNK1A1LQ8N752 337 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 ZNF740Q8NDX6 193 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 ABHD11Q8NFV4 315 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 STAG3L4Q8TBR4 150 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 SLC5A11Q8WWX8 675 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 TTC9Q92623 222 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 EXTL1Q92935 676 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 ISL2Q96A47 359 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 C10orf90Q96M02 699 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 GPR78Q96P69 363 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 ATOH8Q96SQ7 321 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 MACROD1Q9BQ69 325 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 DPH2Q9BQC3 489 aaPredicted RBP14.52□□□□□ -0.09
LIG1-219ENST00000600055 GPR87Q9BY21 358 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 NLNQ9BYT8 704 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 ZNF358Q9NW07 568 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 WWOXQ9NZC7 414 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 RUVBL1Q9Y265 456 aaKnown RBP14.52□□□□□ -0.09
LIG1-219ENST00000600055 DYRK1BQ9Y463 629 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 ITPR1Q14643 2758 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 PCM1Q15154 2024 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 NBEAQ8NFP9 2946 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 A0A1B0GX78 115 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 SUPT3HB4E1H0 165 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 UBXN8O00124 270 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 KERAO60938 352 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 CNOT3O75175 753 aaKnown RBP14.51□□□□□ -0.09
LIG1-219ENST00000600055 SUPT3HO75486 399 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 KRT38O76015 456 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 KLHL2O95198 593 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 RAB40ALP0C0E4 278 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 OR1D4P47884 311 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 HSPA7P48741 367 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 CCR8P51685 355 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 RPS15AP62244 130 aaKnown RBP14.51□□□□□ -0.09
LIG1-219ENST00000600055 RHDQ02161 417 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 NCF4Q15080 339 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 TBR1Q16650 682 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 FAM83EQ2M2I3 478 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 FAM214AQ32MH5 1076 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 YOD1Q5VVQ6 348 aaPredicted RBP14.51□□□□□ -0.09
LIG1-219ENST00000600055 SULT1C3Q6IMI6 304 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 PCSK4Q6UW60 755 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 TAOK1Q7L7X3 1001 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 KLHDC8AQ8IYD2 350 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 PDPRQ8NCN5 879 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 OR4K1Q8NGD4 311 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 RERGQ96A58 199 aaPredicted RBP14.51□□□□□ -0.09
LIG1-219ENST00000600055 CABS1Q96KC9 395 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 BBC3Q96PG8 261 aaPredicted RBP14.51□□□□□ -0.09
LIG1-219ENST00000600055 IFT80Q9P2H3 777 aaPredicted RBP14.51□□□□□ -0.09
LIG1-219ENST00000600055 PTBP2Q9UKA9 531 aaKnown RBP14.51□□□□□ -0.09
LIG1-219ENST00000600055 ASB1Q9Y576 335 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 MAU2Q9Y6X3 613 aa14.51□□□□□ -0.09
LIG1-219ENST00000600055 LOC400499M0QZD8 3231 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 ANKRD12Q6UB98 2062 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 CDC14CA4D256 554 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 C9J4A7 227 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 S100BP04271 92 aaPredicted RBP14.5□□□□□ -0.09
LIG1-219ENST00000600055 SHBGP04278 402 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 MTHFD2P13995 350 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 CNTFP26441 200 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 VARSP26640 1264 aaKnown RBP14.5□□□□□ -0.09
LIG1-219ENST00000600055 GGT5P36269 586 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 AGTR2P50052 363 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 MC1RQ01726 317 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 IL10RAQ13651 578 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 DEFB109BQ30KR1 87 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 LINC00303Q3SY05 128 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 CDKL4Q5MAI5 379 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 ADGRD1Q6QNK2 874 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 NXPE4Q6UWF7 544 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 COX15Q7KZN9 410 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 CCDC91Q7Z6B0 441 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 TMPRSS11BQ86T26 416 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 TCAIMQ8N3R3 496 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 ARHGEF39Q8N4T4 335 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 UBLCP1Q8WVY7 318 aaPredicted RBP14.5□□□□□ -0.09
LIG1-219ENST00000600055 NUDT4Q9NZJ9 180 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 GPN3Q9UHW5 284 aaPredicted RBP14.5□□□□□ -0.09
LIG1-219ENST00000600055 TCFL5Q9UL49 500 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 MRPS2Q9Y399 296 aaKnown RBP14.5□□□□□ -0.09
LIG1-219ENST00000600055 KCNE2Q9Y6J6 123 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 MGAQ8IWI9 3026 aa14.5□□□□□ -0.09
LIG1-219ENST00000600055 KCNE1BA0A087WTH5 132 aa14.49□□□□□ -0.09
LIG1-219ENST00000600055 OR1F1O43749 312 aa14.49□□□□□ -0.09
LIG1-219ENST00000600055 CCNT2O60583 730 aaKnown RBP14.49□□□□□ -0.09
LIG1-219ENST00000600055 STK16O75716 305 aa14.49□□□□□ -0.09
LIG1-219ENST00000600055 KLF7O75840 302 aaPredicted RBP14.49□□□□□ -0.09
LIG1-219ENST00000600055 SNRPAP09012 282 aaKnown RBP14.49□□□□□ -0.09
LIG1-219ENST00000600055 GRK3P35626 688 aa14.49□□□□□ -0.09
LIG1-219ENST00000600055 ACAP2Q15057 778 aa14.49□□□□□ -0.09
LIG1-219ENST00000600055 MUM1Q2TAK8 710 aa14.49□□□□□ -0.09
LIG1-219ENST00000600055 SYVN1Q86TM6 617 aa14.49□□□□□ -0.09
LIG1-219ENST00000600055 SNX31Q8N9S9 440 aa14.49□□□□□ -0.09
LIG1-219ENST00000600055 MFSD9Q8NBP5 474 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms