RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	HSD17B2	P37059	387 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	SLC1A2	P43004	574 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	MAGEA6	P43360	314 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	THOC5	Q13769	683 aa	Known RBP	9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	TTLL9	Q3SXZ7	439 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	THEMIS2	Q5TEJ8	643 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	GARNL3	Q5VVW2	1013 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	HIBCH	Q6NVY1	386 aa	Predicted RBP	9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	NEK10	Q6ZWH5	1172 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	PIWIL4	Q7Z3Z4	852 aa	Known RBP	9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	TICAM1	Q8IUC6	712 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	SRRM1	Q8IYB3	904 aa	Known RBP	9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	LRRC56	Q8IYG6	542 aa	Predicted RBP	9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	CPNE9	Q8IYJ1	553 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	ASB11	Q8WXH4	323 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	NR4A3	Q92570	626 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	HAS2	Q92819	552 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	PRAP1	Q96NZ9	151 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	GPR21	Q99679	349 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	MACROD1	Q9BQ69	325 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	TGIF2	Q9GZN2	237 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	ZNF700	Q9H0M5	742 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	UTP6	Q9NYH9	597 aa	Known RBP	9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	VPS9D1	Q9Y2B5	631 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	ABCA12	Q86UK0	2595 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	ZCWPW2	A0A1B0GU75	182 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776		A0A1B0GUH1	482 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	FAM237B	A0A1B0GVD1	139 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	OR2W5	A6NFC9	320 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	ENO4	A6NNW6	628 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	GOLGA6L6	A8MZA4	724 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	GFY	I3L273	518 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	SEC24D	O94855	1032 aa	Predicted RBP	9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	KRT14	P02533	472 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	CCDC175	P0C221	793 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	C8orf89	P0DMQ9	161 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	MST1	P26927	711 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	IMPA1	P29218	277 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	SKIV2L2	P42285	1042 aa	Known RBP	9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	ABAT	P80404	500 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	SARNP	P82979	210 aa	Known RBP	9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	MPP1	Q00013	466 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	PMP22	Q01453	160 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	RELA	Q04206	551 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	ZNF33B	Q06732	778 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	MINDY4	Q4G0A6	757 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	MFSD4B	Q5TF39	518 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	TMEM205	Q6UW68	189 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	GFRAL	Q6UXV0	394 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	CYHR1	Q6ZMK1	362 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	RIPOR1	Q6ZS17	1223 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	LANCL3	Q6ZV70	420 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	VN1R4	Q7Z5H5	301 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	AGGF1	Q8N302	714 aa	eCLIP	9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	FBXO15	Q8NCQ5	510 aa	Predicted RBP	9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	CD200R1	Q8TD46	325 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	KCNJ9	Q92806	393 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	MARVELD3	Q96A59	401 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	IMMP1L	Q96LU5	166 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	VN1R1	Q9GZP7	353 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	CCDC68	Q9H2F9	335 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	HCN3	Q9P1Z3	774 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	SH2B3	Q9UQQ2	575 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	DHRS7	Q9Y394	339 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	CPAMD8	Q8IZJ3	1885 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	HEATR5B	Q9P2D3	2071 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	ZGRF1	Q86YA3	2104 aa		9.97	□□□□□ -0.81
LSM4-205	ENST00000597776	FBN2	P35556	2912 aa		9.96	□□□□□ -0.81
LSM4-205	ENST00000597776	SDR42E2	A6NKP2	422 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	PRSS44	E7EML9	344 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	TXNDC9	O14530	226 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	ZBTB14	O43829	449 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	WISP2	O76076	250 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	UNC5C	O95185	931 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	MPC1L	P0DKB6	136 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	ENO3	P13929	434 aa	Predicted RBP	9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	IL1RN	P18510	177 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	TNFRSF8	P28908	595 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	COIL	P38432	576 aa	Predicted RBP	9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	AVPR1B	P47901	424 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	ST13	P50502	369 aa	Known RBP	9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	TBPL1	P62380	186 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	FAM53B	Q14153	422 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	INA	Q16352	499 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	NDUFA9	Q16795	377 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	ABHD17B	Q5VST6	288 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	FCRLB	Q6BAA4	426 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	MBOAT1	Q6ZNC8	495 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	ZNF662	Q6ZS27	426 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	UBE2R2	Q712K3	238 aa	Predicted RBP	9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	TRIM58	Q8NG06	486 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	ZCCHC10	Q8TBK6	192 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	METTL21A	Q8WXB1	218 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	MS4A14	Q96JA4	679 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	CCDC138	Q96M89	665 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	SERPINB12	Q96P63	405 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	NDN	Q99608	321 aa		9.96	□□□□□ -0.82
LSM4-205	ENST00000597776	EBNA1BP2	Q99848	306 aa	Known RBP	9.96	□□□□□ -0.82

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