RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 ISCA2Q86U28 154 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 KLHDC8AQ8IYD2 350 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 CAMKVQ8NCB2 501 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 OR4K1Q8NGD4 311 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 RHEBL1Q8TAI7 183 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 PTERQ96BW5 349 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 NXNL1Q96CM4 212 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 MVB12AQ96EY5 273 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 TSNARE1Q96NA8 513 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 VPS11Q9H270 941 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 ALG9Q9H6U8 611 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 PELI2Q9HAT8 420 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 IGSF5Q9NSI5 407 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 NUDT4Q9NZJ9 180 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 TCFL5Q9UL49 500 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 POLHQ9Y253 713 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 CELSR3Q9NYQ7 3312 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 LAMA5O15230 3695 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 CDC14CA4D256 554 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 ATXN7O15265 892 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 KERAO60938 352 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 STK16O75716 305 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 WDR47O94967 919 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 KLHL2O95198 593 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 ALBP02768 609 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 ALDOAP04075 364 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 CAPN1P07384 714 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 SNRPAP09012 282 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 GNAZP19086 355 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 CXCR2P25025 360 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 SLC6A12P48065 614 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 SLC29A2Q14542 456 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 TBR1Q16650 682 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 UGT8Q16880 541 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 PLD3Q8IV08 490 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 PDPRQ8NCN5 879 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 DCAKDQ8WVC6 231 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 KCTD4Q8WVF5 259 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 THAP4Q8WY91 577 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 TTC9Q92623 222 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 FKBP10Q96AY3 582 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 MTBPQ96DY7 904 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 OR4K3Q96R72 315 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 AIF1LQ9BQI0 150 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 SARGQ9BW04 601 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 TXLNGYQ9BZA5 131 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 ZNF304Q9HCX3 659 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 GPRC5BQ9NZH0 403 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 FETUBQ9UGM5 382 aa16.49■□□□□ 0.23
SHKBP1-212ENST00000596163 TRBC2A0A5B9 178 aa16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 EIF4E1BA6NMX2 242 aaKnown RBP16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 TK2O00142 265 aa16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 SFTPCP11686 197 aa16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 COL6A2P12110 1019 aa16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 CCR10P46092 362 aa16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 CSRP3P50461 194 aa16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 DLG1Q12959 904 aa16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 DEFB109BQ30KR1 87 aa16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 ADGRD1Q6QNK2 874 aa16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 NXPE4Q6UWF7 544 aa16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 OVCH1Q7RTY7 1134 aa16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 ASPGQ86U10 573 aa16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 MFSD9Q8NBP5 474 aa16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 SLC13A3Q8WWT9 602 aa16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 NEIL2Q969S2 332 aa16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 ISL2Q96A47 359 aa16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 COL26A1Q96A83 441 aa16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 IP6K3Q96PC2 410 aa16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 RUFY1Q96T51 708 aa16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 DNAJC11Q9NVH1 559 aa16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 PTBP2Q9UKA9 531 aaKnown RBP16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 NXT1Q9UKK6 140 aaKnown RBP16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 SH2B3Q9UQQ2 575 aa16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 RUVBL1Q9Y265 456 aaKnown RBP16.48■□□□□ 0.23
SHKBP1-212ENST00000596163 IQANK1A0A1B0GTG1 560 aa16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 SUPT3HB4E1H0 165 aa16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 TRIM49D1C9J1S8 452 aa16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 CLGNO14967 610 aa16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 TAPBPO15533 448 aa16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 OR1F1O43749 312 aa16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 SUPT3HO75486 399 aa16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 RBP1P09455 135 aa16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 SLC35G6P0C7Q6 338 aa16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 FOLR3P41439 243 aa16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 AVPR1BP47901 424 aa16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 RPS18P62269 152 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 CDC16Q13042 620 aa16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 FAM53BQ14153 422 aa16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 SSPNQ14714 243 aa16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 TSNAXIP1Q2TAA8 658 aa16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 HKDC1Q2TB90 917 aa16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 CATSPEREQ5SY80 951 aa16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 MRPL14Q6P1L8 145 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 RAB43Q86YS6 212 aa16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 GSPT2Q8IYD1 628 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 CENPLQ8N0S6 344 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 APOBEC4Q8WW27 367 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 EXTL1Q92935 676 aa16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 EXT2Q93063 718 aa16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 ATOH8Q96SQ7 321 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms