RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 TMEM126BQ8IUX1 230 aa18.49■□□□□ 0.55
PNKP-207ENST00000596014 GPR135Q8IZ08 494 aa18.49■□□□□ 0.55
PNKP-207ENST00000596014 OR4N4Q8N0Y3 316 aa18.49■□□□□ 0.55
PNKP-207ENST00000596014 SNX31Q8N9S9 440 aa18.49■□□□□ 0.55
PNKP-207ENST00000596014 RNF31Q96EP0 1072 aa18.49■□□□□ 0.55
PNKP-207ENST00000596014 ZNF285Q96NJ3 590 aa18.49■□□□□ 0.55
PNKP-207ENST00000596014 OR2A5Q96R48 311 aa18.49■□□□□ 0.55
PNKP-207ENST00000596014 ULBP3Q9BZM4 244 aa18.49■□□□□ 0.55
PNKP-207ENST00000596014 SYNPO2LQ9H987 977 aa18.49■□□□□ 0.55
PNKP-207ENST00000596014 GPRC5BQ9NZH0 403 aa18.49■□□□□ 0.55
PNKP-207ENST00000596014 OPTCQ9UBM4 332 aa18.49■□□□□ 0.55
PNKP-207ENST00000596014 TMEM184BQ9Y519 407 aaPredicted RBP18.49■□□□□ 0.55
PNKP-207ENST00000596014 TNPO3Q9Y5L0 923 aaKnown RBP18.49■□□□□ 0.55
PNKP-207ENST00000596014 LRRC14BA6NHZ5 514 aa18.48■□□□□ 0.55
PNKP-207ENST00000596014 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.48■□□□□ 0.55
PNKP-207ENST00000596014 E7EQ34 232 aa18.48■□□□□ 0.55
PNKP-207ENST00000596014 SCRG1O75711 98 aa18.48■□□□□ 0.55
PNKP-207ENST00000596014 STK17BO94768 372 aa18.48■□□□□ 0.55
PNKP-207ENST00000596014 KIAA0754O94854 1291 aa18.48■□□□□ 0.55
PNKP-207ENST00000596014 SIX3O95343 332 aaPredicted RBP18.48■□□□□ 0.55
PNKP-207ENST00000596014 VSX2P58304 361 aaPredicted RBP18.48■□□□□ 0.55
PNKP-207ENST00000596014 MEF2AQ02078 507 aaPredicted RBP18.48■□□□□ 0.55
PNKP-207ENST00000596014 PDK4Q16654 411 aa18.48■□□□□ 0.55
PNKP-207ENST00000596014 PRAMEF17Q5VTA0 474 aa18.48■□□□□ 0.55
PNKP-207ENST00000596014 TTC19Q6DKK2 380 aaPredicted RBP18.48■□□□□ 0.55
PNKP-207ENST00000596014 NXPE4Q6UWF7 544 aa18.48■□□□□ 0.55
PNKP-207ENST00000596014 SLCO4C1Q6ZQN7 724 aa18.48■□□□□ 0.55
PNKP-207ENST00000596014 TMPRSS11BQ86T26 416 aa18.48■□□□□ 0.55
PNKP-207ENST00000596014 BANPQ8N9N5 519 aa18.48■□□□□ 0.55
PNKP-207ENST00000596014 PELI2Q9HAT8 420 aa18.48■□□□□ 0.55
PNKP-207ENST00000596014 PCDHB3Q9Y5E6 796 aa18.48■□□□□ 0.55
PNKP-207ENST00000596014 KCNE1BA0A087WTH5 132 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 FEZF1A0PJY2 475 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 H0YGG7 62 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 STMND1H3BQB6 276 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 STX16-NPEPL1H3BU86 382 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 STX16O14662 325 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 NTRK1P04629 796 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 EPORP19235 508 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 TAC1P20366 129 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 GRK3P35626 688 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 MDH1P40925 334 aaKnown RBP18.47■□□□□ 0.55
PNKP-207ENST00000596014 PCBP4P57723 403 aaKnown RBP18.47■□□□□ 0.55
PNKP-207ENST00000596014 ARF3P61204 181 aaPredicted RBP18.47■□□□□ 0.55
PNKP-207ENST00000596014 GUCY1A3Q02108 690 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 TNFAIP8L3Q5GJ75 292 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 TCTE1Q5JU00 501 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 WASHC2DQ5SRD0 308 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 METTL2BQ6P1Q9 378 aaKnown RBP18.47■□□□□ 0.55
PNKP-207ENST00000596014 SNIP1Q8TAD8 396 aaKnown RBP18.47■□□□□ 0.55
PNKP-207ENST00000596014 ENAMQ9NRM1 1142 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 IRAK4Q9NWZ3 460 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 MKS1Q9NXB0 559 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 AP1M2Q9Y6Q5 423 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 MAP1BP46821 2468 aaKnown RBP18.47■□□□□ 0.55
PNKP-207ENST00000596014 A8MT66 165 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 ZSCAN9O15535 394 aaPredicted RBP18.47■□□□□ 0.55
PNKP-207ENST00000596014 ZNF749O43361 778 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 LCMT2O60294 686 aaKnown RBP18.47■□□□□ 0.55
PNKP-207ENST00000596014 DLGAP3O95886 979 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 PROCP04070 461 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 C1GALT1C1LP0DN25 315 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 VARSP26640 1264 aaKnown RBP18.47■□□□□ 0.55
PNKP-207ENST00000596014 RPS15AP62244 130 aaKnown RBP18.47■□□□□ 0.55
PNKP-207ENST00000596014 CCDC153Q494R4 210 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 ATG9BQ674R7 924 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 TLDC1Q6P9B6 456 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 DTX1Q86Y01 620 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 TEX9Q8N6V9 391 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 SLC38A9Q8NBW4 561 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 ZCCHC14Q8WYQ9 949 aaKnown RBP18.47■□□□□ 0.55
PNKP-207ENST00000596014 APOPT1Q96IL0 206 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 SMC6Q96SB8 1091 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 SARGQ9BW04 601 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 C12orf65Q9H3J6 166 aaKnown RBP18.47■□□□□ 0.55
PNKP-207ENST00000596014 STARD5Q9NSY2 213 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 SENP1Q9P0U3 644 aa18.47■□□□□ 0.55
PNKP-207ENST00000596014 TMEM8BA6NDV4 472 aa18.46■□□□□ 0.55
PNKP-207ENST00000596014 E2F3O00716 465 aa18.46■□□□□ 0.55
PNKP-207ENST00000596014 CLGNO14967 610 aa18.46■□□□□ 0.55
PNKP-207ENST00000596014 DLX3O60479 287 aa18.46■□□□□ 0.55
PNKP-207ENST00000596014 PLIN3O60664 434 aa18.46■□□□□ 0.55
PNKP-207ENST00000596014 PRAMEF4O60810 478 aa18.46■□□□□ 0.55
PNKP-207ENST00000596014 EIF2S1P05198 315 aaKnown RBP18.46■□□□□ 0.55
PNKP-207ENST00000596014 CREB1P16220 341 aa18.46■□□□□ 0.55
PNKP-207ENST00000596014 EPB42P16452 691 aa18.46■□□□□ 0.55
PNKP-207ENST00000596014 ATP5F1P24539 256 aaPredicted RBP18.46■□□□□ 0.55
PNKP-207ENST00000596014 EEF1DP29692 281 aaKnown RBP18.46■□□□□ 0.55
PNKP-207ENST00000596014 ZSCAN26Q16670 478 aa18.46■□□□□ 0.55
PNKP-207ENST00000596014 PRAMEF9Q5VWM5 478 aa18.46■□□□□ 0.55
PNKP-207ENST00000596014 TIPARPQ7Z3E1 657 aaKnown RBP18.46■□□□□ 0.55
PNKP-207ENST00000596014 ZNF655Q8N720 491 aaPredicted RBP18.46■□□□□ 0.55
PNKP-207ENST00000596014 KDF1Q8NAX2 398 aaPredicted RBP18.46■□□□□ 0.55
PNKP-207ENST00000596014 ZNF740Q8NDX6 193 aa18.46■□□□□ 0.55
PNKP-207ENST00000596014 RERGQ96A58 199 aaPredicted RBP18.46■□□□□ 0.55
PNKP-207ENST00000596014 SPNS1Q9H2V7 528 aa18.46■□□□□ 0.55
PNKP-207ENST00000596014 EHD1Q9H4M9 534 aa18.46■□□□□ 0.55
PNKP-207ENST00000596014 ACTR5Q9H9F9 607 aaPredicted RBP18.46■□□□□ 0.55
PNKP-207ENST00000596014 GEMIN8Q9NWZ8 242 aaKnown RBP18.46■□□□□ 0.55
PNKP-207ENST00000596014 PLLPQ9Y342 182 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms