RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 ZNF460Q14592 562 aa12.37□□□□□ -0.43
SCAF1-202ENST00000595242 TBCCQ15814 346 aa12.37□□□□□ -0.43
SCAF1-202ENST00000595242 FAM83EQ2M2I3 478 aa12.37□□□□□ -0.43
SCAF1-202ENST00000595242 AGAP9Q5VTM2 703 aa12.37□□□□□ -0.43
SCAF1-202ENST00000595242 IRGCQ6NXR0 463 aa12.37□□□□□ -0.43
SCAF1-202ENST00000595242 ZNF549Q6P9A3 640 aa12.37□□□□□ -0.43
SCAF1-202ENST00000595242 SDCCAG8Q86SQ7 713 aaPredicted RBP12.37□□□□□ -0.43
SCAF1-202ENST00000595242 MTDHQ86UE4 582 aaKnown RBP12.37□□□□□ -0.43
SCAF1-202ENST00000595242 PHYKPLQ8IUZ5 450 aa12.37□□□□□ -0.43
SCAF1-202ENST00000595242 ENDOVQ8N8Q3 282 aaKnown RBP12.37□□□□□ -0.43
SCAF1-202ENST00000595242 SIDT2Q8NBJ9 832 aaKnown RBP12.37□□□□□ -0.43
SCAF1-202ENST00000595242 PIH1D2Q8WWB5 315 aa12.37□□□□□ -0.43
SCAF1-202ENST00000595242 RSC1A1Q92681 617 aa12.37□□□□□ -0.43
SCAF1-202ENST00000595242 CCDC126Q96EE4 140 aa12.37□□□□□ -0.43
SCAF1-202ENST00000595242 SCRN2Q96FV2 425 aa12.37□□□□□ -0.43
SCAF1-202ENST00000595242 ZDHHC12Q96GR4 267 aa12.37□□□□□ -0.43
SCAF1-202ENST00000595242 TMEM237Q96Q45 408 aa12.37□□□□□ -0.43
SCAF1-202ENST00000595242 AARSD1Q9BTE6 412 aaKnown RBP12.37□□□□□ -0.43
SCAF1-202ENST00000595242 GATA5Q9BWX5 397 aaPredicted RBP12.37□□□□□ -0.43
SCAF1-202ENST00000595242 DRC3Q9H069 523 aa12.37□□□□□ -0.43
SCAF1-202ENST00000595242 CHST8Q9H2A9 424 aa12.37□□□□□ -0.43
SCAF1-202ENST00000595242 SLC40A1Q9NP59 571 aa12.37□□□□□ -0.43
SCAF1-202ENST00000595242 TCFL5Q9UL49 500 aa12.37□□□□□ -0.43
SCAF1-202ENST00000595242 VPS9D1Q9Y2B5 631 aa12.37□□□□□ -0.43
SCAF1-202ENST00000595242 VWA7Q9Y334 891 aa12.37□□□□□ -0.43
SCAF1-202ENST00000595242 ZNF711Q9Y462 761 aa12.37□□□□□ -0.43
SCAF1-202ENST00000595242 PCDHGA10Q9Y5H3 936 aa12.37□□□□□ -0.43
SCAF1-202ENST00000595242 KLF2Q9Y5W3 355 aaPredicted RBP12.37□□□□□ -0.43
SCAF1-202ENST00000595242 A0A1B0GUH1 482 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 CCDC189A1A4V9 331 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 H0YHG0 523 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 CCL22O00626 93 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 NPHS1O60500 1241 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 CCDC22O60826 627 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 ALPPP05187 535 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 PYGLP06737 847 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 RBP1P09455 135 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 PIRTP0C851 137 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 COX6B1P14854 86 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 NQO1P15559 274 aaKnown RBP12.36□□□□□ -0.43
SCAF1-202ENST00000595242 HOXB4P17483 251 aaPredicted RBP12.36□□□□□ -0.43
SCAF1-202ENST00000595242 ATP5F1P24539 256 aaPredicted RBP12.36□□□□□ -0.43
SCAF1-202ENST00000595242 AQP5P55064 265 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 ADARP55265 1226 aaKnown RBP12.36□□□□□ -0.43
SCAF1-202ENST00000595242 TIAL1Q01085 375 aaKnown RBP eCLIP12.36□□□□□ -0.43
SCAF1-202ENST00000595242 RCN2Q14257 317 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 PTPRCAPQ14761 206 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 ACAP2Q15057 778 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 ARMC12Q5T9G4 340 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 NAPRTQ6XQN6 538 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 CUZD1Q86UP6 607 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 NLRP8Q86W28 1048 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 TRIM48Q8IWZ4 208 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 ZBTB2Q8N680 514 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 SLC38A9Q8NBW4 561 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 OR4K2Q8NGD2 314 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 HEXDCQ8WVB3 486 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 LPGAT1Q92604 370 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 KLHL29Q96CT2 875 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 SCYL1Q96KG9 808 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 LYSMD1Q96S90 227 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 NDNQ99608 321 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 TRIM8Q9BZR9 551 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 GPAMQ9HCL2 828 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 FGF21Q9NSA1 209 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 IL17CQ9P0M4 197 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 SCHIP1Q9P0W5 487 aaPredicted RBP12.36□□□□□ -0.43
SCAF1-202ENST00000595242 ZNF624Q9P2J8 865 aaPredicted RBP12.36□□□□□ -0.43
SCAF1-202ENST00000595242 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.36□□□□□ -0.43
SCAF1-202ENST00000595242 RAP2CQ9Y3L5 183 aa12.36□□□□□ -0.43
SCAF1-202ENST00000595242 ZNF469Q96JG9 3925 aaPredicted RBP12.35□□□□□ -0.43
SCAF1-202ENST00000595242 IGHV5-51A0A0C4DH38 117 aa12.35□□□□□ -0.43
SCAF1-202ENST00000595242 E2F3O00716 465 aa12.35□□□□□ -0.43
SCAF1-202ENST00000595242 FCHO1O14526 889 aa12.35□□□□□ -0.43
SCAF1-202ENST00000595242 BUD23O43709 281 aaKnown RBP12.35□□□□□ -0.43
SCAF1-202ENST00000595242 DLX3O60479 287 aa12.35□□□□□ -0.43
SCAF1-202ENST00000595242 SCRG1O75711 98 aa12.35□□□□□ -0.43
SCAF1-202ENST00000595242 KLK3P07288 261 aaPredicted RBP12.35□□□□□ -0.43
SCAF1-202ENST00000595242 SERPINA6P08185 405 aa12.35□□□□□ -0.43
SCAF1-202ENST00000595242 RAB40ALP0C0E4 278 aa12.35□□□□□ -0.43
SCAF1-202ENST00000595242 EBLN1P0CF75 366 aa12.35□□□□□ -0.43
SCAF1-202ENST00000595242 EDN3P14138 238 aa12.35□□□□□ -0.43
SCAF1-202ENST00000595242 CTPS1P17812 591 aa12.35□□□□□ -0.43
SCAF1-202ENST00000595242 SAT1P21673 171 aa12.35□□□□□ -0.43
SCAF1-202ENST00000595242 CA5AP35218 305 aa12.35□□□□□ -0.43
SCAF1-202ENST00000595242 HMGCLP35914 325 aa12.35□□□□□ -0.43
SCAF1-202ENST00000595242 SLC19A1P41440 591 aa12.35□□□□□ -0.43
SCAF1-202ENST00000595242 RASSF2P50749 326 aa12.35□□□□□ -0.43
SCAF1-202ENST00000595242 CDKN2DP55273 166 aa12.35□□□□□ -0.43
SCAF1-202ENST00000595242 XIAPP98170 497 aa12.35□□□□□ -0.43
SCAF1-202ENST00000595242 ACY1Q03154 408 aa12.35□□□□□ -0.43
SCAF1-202ENST00000595242 PTSQ03393 145 aa12.35□□□□□ -0.43
SCAF1-202ENST00000595242 ATP1A4Q13733 1029 aa12.35□□□□□ -0.43
SCAF1-202ENST00000595242 AARS2Q5JTZ9 985 aaKnown RBP12.35□□□□□ -0.43
SCAF1-202ENST00000595242 LRRC66Q68CR7 880 aa12.35□□□□□ -0.43
SCAF1-202ENST00000595242 LCN10Q6JVE6 187 aa12.35□□□□□ -0.43
SCAF1-202ENST00000595242 KLC3Q6P597 504 aa12.35□□□□□ -0.43
SCAF1-202ENST00000595242 Q6ZS92 163 aa12.35□□□□□ -0.43
SCAF1-202ENST00000595242 PIWIL4Q7Z3Z4 852 aaKnown RBP12.35□□□□□ -0.43
SCAF1-202ENST00000595242 MAVSQ7Z434 540 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms