RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 CYP20A1Q6UW02 462 aa19.98■□□□□ 0.79
PNKP-203ENST00000593946 BMP8AQ7Z5Y6 402 aa19.98■□□□□ 0.79
PNKP-203ENST00000593946 PARP9Q8IXQ6 854 aa19.98■□□□□ 0.79
PNKP-203ENST00000593946 AVL9Q8NBF6 648 aa19.98■□□□□ 0.79
PNKP-203ENST00000593946 RBM15BQ8NDT2 890 aaKnown RBP19.98■□□□□ 0.79
PNKP-203ENST00000593946 ARID1BQ8NFD5 2236 aaPredicted RBP19.98■□□□□ 0.79
PNKP-203ENST00000593946 FLVCR1-AS1Q8TAF5 88 aa19.98■□□□□ 0.79
PNKP-203ENST00000593946 APIPQ96GX9 242 aa19.98■□□□□ 0.79
PNKP-203ENST00000593946 FCRL1Q96LA6 429 aa19.98■□□□□ 0.79
PNKP-203ENST00000593946 RTKNQ9BST9 563 aa19.98■□□□□ 0.79
PNKP-203ENST00000593946 RHBGQ9H310 441 aa19.98■□□□□ 0.79
PNKP-203ENST00000593946 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.98■□□□□ 0.79
PNKP-203ENST00000593946 TMEM45AQ9NWC5 275 aa19.98■□□□□ 0.79
PNKP-203ENST00000593946 SNX11Q9Y5W9 270 aa19.98■□□□□ 0.79
PNKP-203ENST00000593946 ANKRD28O15084 1053 aa19.97■□□□□ 0.79
PNKP-203ENST00000593946 NOBOXO60393 691 aa19.97■□□□□ 0.79
PNKP-203ENST00000593946 SDC3O75056 442 aa19.97■□□□□ 0.79
PNKP-203ENST00000593946 EZRP15311 586 aaKnown RBP19.97■□□□□ 0.79
PNKP-203ENST00000593946 CMPK1P30085 196 aa19.97■□□□□ 0.79
PNKP-203ENST00000593946 CPOXP36551 454 aa19.97■□□□□ 0.79
PNKP-203ENST00000593946 FASLGP48023 281 aa19.97■□□□□ 0.79
PNKP-203ENST00000593946 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.97■□□□□ 0.79
PNKP-203ENST00000593946 VN1R5Q7Z5H4 357 aa19.97■□□□□ 0.79
PNKP-203ENST00000593946 C17orf82Q86X59 251 aaPredicted RBP19.97■□□□□ 0.79
PNKP-203ENST00000593946 FAM20CQ8IXL6 584 aa19.97■□□□□ 0.79
PNKP-203ENST00000593946 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.97■□□□□ 0.79
PNKP-203ENST00000593946 ANKRD53Q8N9V6 530 aa19.97■□□□□ 0.79
PNKP-203ENST00000593946 C11orf24Q96F05 449 aaPredicted RBP19.97■□□□□ 0.79
PNKP-203ENST00000593946 TEX37Q96LM6 180 aa19.97■□□□□ 0.79
PNKP-203ENST00000593946 ACTL8Q9H568 366 aa19.97■□□□□ 0.79
PNKP-203ENST00000593946 TMEM184CQ9NVA4 438 aa19.97■□□□□ 0.79
PNKP-203ENST00000593946 UCKL1Q9NWZ5 548 aa19.97■□□□□ 0.79
PNKP-203ENST00000593946 KMT2EQ8IZD2 1858 aa19.97■□□□□ 0.79
PNKP-203ENST00000593946 CFAP73A6NFT4 308 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 SNRPB2P08579 225 aaKnown RBP19.96■□□□□ 0.79
PNKP-203ENST00000593946 HRH2P25021 359 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 CNR2P34972 360 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 ZFP36L2P47974 494 aaKnown RBP19.96■□□□□ 0.79
PNKP-203ENST00000593946 MAZP56270 477 aaKnown RBP19.96■□□□□ 0.79
PNKP-203ENST00000593946 UFM1P61960 85 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 PHEXP78562 749 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 ZNF528Q3MIS6 628 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 CACHD1Q5VU97 1274 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 PEAR1Q5VY43 1037 aaPredicted RBP19.96■□□□□ 0.79
PNKP-203ENST00000593946 PROKR1Q8TCW9 393 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 SLC25A23Q9BV35 468 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 TBC1D10AQ9BXI6 508 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 ADGRE2Q9UHX3 823 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 DLGAP4Q9Y2H0 992 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 OR6C74A6NCV1 312 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 GYG2O15488 501 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 SLC22A3O75751 556 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 ANXA6P08133 673 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 BCKDHAP12694 445 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 KCNJ2P63252 427 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 TBL3Q12788 808 aaKnown RBP19.96■□□□□ 0.79
PNKP-203ENST00000593946 RBBP5Q15291 538 aaKnown RBP19.96■□□□□ 0.79
PNKP-203ENST00000593946 DEFB133Q30KQ1 61 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 KIAA1614Q5VZ46 1190 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 ZNF425Q6IV72 752 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 OGFOD3Q6PK18 319 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 LIX1Q8N485 282 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 ARL14Q8N4G2 192 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 SLC45A3Q96JT2 553 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 APOLD1Q96LR9 279 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 OR2A14Q96R47 310 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 DPH7Q9BTV6 452 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 ENTPD2Q9Y5L3 495 aa19.96■□□□□ 0.79
PNKP-203ENST00000593946 ADAMTS9Q9P2N4 1935 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 TRBC2A0A5B9 178 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 FEZF1A0PJY2 475 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 POLR2CP19387 275 aaPredicted RBP19.95■□□□□ 0.78
PNKP-203ENST00000593946 JAK1P23458 1154 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 MAPK1P28482 360 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 SERPINB1P30740 379 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 RXRGP48443 463 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 MXRA7P84157 204 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 CUL3Q13618 768 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 RCAN2Q14206 197 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 PTGR1Q14914 329 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 BLOC1S3Q6QNY0 202 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 CEP68Q76N32 757 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 ADCK2Q7Z695 626 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 SYT12Q8IV01 421 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 OR10G6Q8NH81 332 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 RCN3Q96D15 328 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 ELF4Q99607 663 aaPredicted RBP19.95■□□□□ 0.78
PNKP-203ENST00000593946 SARGQ9BW04 601 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 MRPL1Q9BYD6 325 aaKnown RBP19.95■□□□□ 0.78
PNKP-203ENST00000593946 UCK1Q9HA47 277 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 SLC52A3Q9NQ40 469 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 NMRK1Q9NWW6 199 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 ZSCAN32Q9NX65 697 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 ACTR10Q9NZ32 417 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 CSNK1G3Q9Y6M4 447 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 WDFY4Q6ZS81 3184 aa19.95■□□□□ 0.78
PNKP-203ENST00000593946 ANKDD1BA6NHY2 528 aa19.94■□□□□ 0.78
PNKP-203ENST00000593946 PRPS2P11908 318 aa19.94■□□□□ 0.78
PNKP-203ENST00000593946 NQO1P15559 274 aaKnown RBP19.94■□□□□ 0.78
PNKP-203ENST00000593946 UGT2B7P16662 529 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms