RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 SCN3AQ9NY46 2000 aa21.49■■□□□ 1.03
SSBP4-203ENST00000593641 PKDREJQ9NTG1 2253 aa21.49■■□□□ 1.03
SSBP4-203ENST00000593641 CTAGE9A4FU28 777 aa21.48■■□□□ 1.03
SSBP4-203ENST00000593641 FOXS1O43638 330 aa21.48■■□□□ 1.03
SSBP4-203ENST00000593641 WDPCPO95876 746 aa21.48■■□□□ 1.03
SSBP4-203ENST00000593641 CRYABP02511 175 aaKnown RBP21.48■■□□□ 1.03
SSBP4-203ENST00000593641 C8orf89P0DMQ9 161 aa21.48■■□□□ 1.03
SSBP4-203ENST00000593641 ITGAMP11215 1152 aa21.48■■□□□ 1.03
SSBP4-203ENST00000593641 CLCN7P51798 805 aa21.48■■□□□ 1.03
SSBP4-203ENST00000593641 PCOLCEQ15113 449 aa21.48■■□□□ 1.03
SSBP4-203ENST00000593641 SYT16Q17RD7 645 aa21.48■■□□□ 1.03
SSBP4-203ENST00000593641 ABHD17BQ5VST6 288 aa21.48■■□□□ 1.03
SSBP4-203ENST00000593641 FBXO15Q8NCQ5 510 aaPredicted RBP21.48■■□□□ 1.03
SSBP4-203ENST00000593641 ZNF480Q8WV37 535 aa21.48■■□□□ 1.03
SSBP4-203ENST00000593641 RELTQ969Z4 430 aa21.48■■□□□ 1.03
SSBP4-203ENST00000593641 TUBB6Q9BUF5 446 aa21.48■■□□□ 1.03
SSBP4-203ENST00000593641 RNF32Q9H0A6 362 aa21.48■■□□□ 1.03
SSBP4-203ENST00000593641 RUBCNLQ9H714 662 aa21.48■■□□□ 1.03
SSBP4-203ENST00000593641 SUCOQ9UBS9 1254 aaKnown RBP21.48■■□□□ 1.03
SSBP4-203ENST00000593641 E7ENX8 843 aa21.47■■□□□ 1.03
SSBP4-203ENST00000593641 HAT1O14929 419 aa21.47■■□□□ 1.03
SSBP4-203ENST00000593641 P2RX6O15547 441 aa21.47■■□□□ 1.03
SSBP4-203ENST00000593641 RASAL1O95294 804 aa21.47■■□□□ 1.03
SSBP4-203ENST00000593641 VPS41P49754 854 aa21.47■■□□□ 1.03
SSBP4-203ENST00000593641 MAT1AQ00266 395 aaKnown RBP21.47■■□□□ 1.03
SSBP4-203ENST00000593641 TAP2Q03519 686 aa21.47■■□□□ 1.03
SSBP4-203ENST00000593641 ZNF33BQ06732 778 aa21.47■■□□□ 1.03
SSBP4-203ENST00000593641 CUL1Q13616 776 aa21.47■■□□□ 1.03
SSBP4-203ENST00000593641 THOC5Q13769 683 aaKnown RBP21.47■■□□□ 1.03
SSBP4-203ENST00000593641 DHX34Q14147 1143 aaKnown RBP21.47■■□□□ 1.03
SSBP4-203ENST00000593641 TRIP13Q15645 432 aaPredicted RBP21.47■■□□□ 1.03
SSBP4-203ENST00000593641 SP5Q6BEB4 398 aaPredicted RBP21.47■■□□□ 1.03
SSBP4-203ENST00000593641 TMEM205Q6UW68 189 aa21.47■■□□□ 1.03
SSBP4-203ENST00000593641 ARHGEF39Q8N4T4 335 aa21.47■■□□□ 1.03
SSBP4-203ENST00000593641 ZNF669Q96BR6 464 aaPredicted RBP21.47■■□□□ 1.03
SSBP4-203ENST00000593641 KLHL42Q9P2K6 505 aa21.47■■□□□ 1.03
SSBP4-203ENST00000593641 OR5H15A6NDH6 313 aa21.46■■□□□ 1.03
SSBP4-203ENST00000593641 ZBTB14O43829 449 aa21.46■■□□□ 1.03
SSBP4-203ENST00000593641 AVILO75366 819 aa21.46■■□□□ 1.03
SSBP4-203ENST00000593641 ENO3P13929 434 aaPredicted RBP21.46■■□□□ 1.03
SSBP4-203ENST00000593641 LONRF1Q17RB8 773 aa21.46■■□□□ 1.03
SSBP4-203ENST00000593641 MFSD4BQ5TF39 518 aa21.46■■□□□ 1.03
SSBP4-203ENST00000593641 TMEM207Q6UWW9 146 aa21.46■■□□□ 1.03
SSBP4-203ENST00000593641 PLD3Q8IV08 490 aa21.46■■□□□ 1.03
SSBP4-203ENST00000593641 DNAJB8Q8NHS0 232 aa21.46■■□□□ 1.03
SSBP4-203ENST00000593641 GIMAP7Q8NHV1 300 aa21.46■■□□□ 1.03
SSBP4-203ENST00000593641 MCOLN3Q8TDD5 553 aa21.46■■□□□ 1.03
SSBP4-203ENST00000593641 KCNJ9Q92806 393 aa21.46■■□□□ 1.03
SSBP4-203ENST00000593641 MOCOSQ96EN8 888 aa21.46■■□□□ 1.03
SSBP4-203ENST00000593641 SLC30A3Q99726 388 aa21.46■■□□□ 1.03
SSBP4-203ENST00000593641 ABI3Q9P2A4 366 aa21.46■■□□□ 1.03
SSBP4-203ENST00000593641 C19orf25Q9UFG5 118 aaPredicted RBP21.46■■□□□ 1.03
SSBP4-203ENST00000593641 APCP25054 2843 aa21.45■■□□□ 1.02
SSBP4-203ENST00000593641 TRGV8A0A0C4DH27 118 aa21.45■■□□□ 1.02
SSBP4-203ENST00000593641 H0YIG0 161 aa21.45■■□□□ 1.02
SSBP4-203ENST00000593641 H7BY64 318 aa21.45■■□□□ 1.02
SSBP4-203ENST00000593641 CEP104O60308 925 aa21.45■■□□□ 1.02
SSBP4-203ENST00000593641 UNC5CO95185 931 aa21.45■■□□□ 1.02
SSBP4-203ENST00000593641 MPC1LP0DKB6 136 aa21.45■■□□□ 1.02
SSBP4-203ENST00000593641 GPS1Q13098 491 aa21.45■■□□□ 1.02
SSBP4-203ENST00000593641 KCTD19Q17RG1 926 aaPredicted RBP21.45■■□□□ 1.02
SSBP4-203ENST00000593641 MINDY4Q4G0A6 757 aa21.45■■□□□ 1.02
SSBP4-203ENST00000593641 PRELID2Q8N945 189 aa21.45■■□□□ 1.02
SSBP4-203ENST00000593641 ASB11Q8WXH4 323 aa21.45■■□□□ 1.02
SSBP4-203ENST00000593641 PRAP1Q96NZ9 151 aa21.45■■□□□ 1.02
SSBP4-203ENST00000593641 LZTFL1Q9NQ48 299 aa21.45■■□□□ 1.02
SSBP4-203ENST00000593641 FBXO6Q9NRD1 293 aaPredicted RBP21.45■■□□□ 1.02
SSBP4-203ENST00000593641 STMN3Q9NZ72 180 aa21.45■■□□□ 1.02
SSBP4-203ENST00000593641 SEC14L3Q9UDX4 400 aa21.45■■□□□ 1.02
SSBP4-203ENST00000593641 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.44■■□□□ 1.02
SSBP4-203ENST00000593641 FAM237BA0A1B0GVD1 139 aa21.44■■□□□ 1.02
SSBP4-203ENST00000593641 MAGEB16A2A368 324 aa21.44■■□□□ 1.02
SSBP4-203ENST00000593641 PRAMEF2O60811 474 aa21.44■■□□□ 1.02
SSBP4-203ENST00000593641 SEC24DO94855 1032 aaPredicted RBP21.44■■□□□ 1.02
SSBP4-203ENST00000593641 CYC1P08574 325 aa21.44■■□□□ 1.02
SSBP4-203ENST00000593641 HRH2P25021 359 aa21.44■■□□□ 1.02
SSBP4-203ENST00000593641 MAGEA6P43360 314 aa21.44■■□□□ 1.02
SSBP4-203ENST00000593641 RBPJQ06330 500 aa21.44■■□□□ 1.02
SSBP4-203ENST00000593641 MTFR2Q6P444 385 aa21.44■■□□□ 1.02
SSBP4-203ENST00000593641 OR9A4Q8NGU2 314 aa21.44■■□□□ 1.02
SSBP4-203ENST00000593641 IMMP1LQ96LU5 166 aa21.44■■□□□ 1.02
SSBP4-203ENST00000593641 VN1R1Q9GZP7 353 aa21.44■■□□□ 1.02
SSBP4-203ENST00000593641 CCDC177Q9NQR7 707 aaPredicted RBP21.44■■□□□ 1.02
SSBP4-203ENST00000593641 GFYI3L273 518 aa21.43■■□□□ 1.02
SSBP4-203ENST00000593641 NSA2O95478 260 aaKnown RBP21.43■■□□□ 1.02
SSBP4-203ENST00000593641 STATHP02808 62 aa21.43■■□□□ 1.02
SSBP4-203ENST00000593641 PRF1P14222 555 aa21.43■■□□□ 1.02
SSBP4-203ENST00000593641 IMPA1P29218 277 aa21.43■■□□□ 1.02
SSBP4-203ENST00000593641 SKIV2L2P42285 1042 aaKnown RBP21.43■■□□□ 1.02
SSBP4-203ENST00000593641 RPS15AP62244 130 aaKnown RBP21.43■■□□□ 1.02
SSBP4-203ENST00000593641 CTBP1Q13363 440 aa21.43■■□□□ 1.02
SSBP4-203ENST00000593641 ART3Q13508 389 aa21.43■■□□□ 1.02
SSBP4-203ENST00000593641 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.43■■□□□ 1.02
SSBP4-203ENST00000593641 UBE2R2Q712K3 238 aaPredicted RBP21.43■■□□□ 1.02
SSBP4-203ENST00000593641 CPEB2Q7Z5Q1 589 aaKnown RBP21.43■■□□□ 1.02
SSBP4-203ENST00000593641 CAND1Q86VP6 1230 aaKnown RBP21.43■■□□□ 1.02
SSBP4-203ENST00000593641 GAS2L3Q86XJ1 694 aa21.43■■□□□ 1.02
SSBP4-203ENST00000593641 DENND6AQ8IWF6 608 aa21.43■■□□□ 1.02
SSBP4-203ENST00000593641 UNKQ9C0B0 810 aaKnown RBP21.43■■□□□ 1.02
SSBP4-203ENST00000593641 TMEM184CQ9NVA4 438 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms