RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, human

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-229	ENST00000592771	ATG13	O75143	517 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	UGT2B11	O75310	529 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	PSIP1	O75475	530 aa	Known RBP	13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	ZBTB11	O95625	1053 aa	Predicted RBP	13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	PRPH2	P23942	346 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	MAPK1	P28482	360 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	CLDN8	P56748	225 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	ISL1	P61371	349 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	SFSWAP	Q12872	951 aa	Known RBP	13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	KCNAB2	Q13303	367 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	PON2	Q15165	354 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	TMEM52B	Q4KMG9	183 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	USP39	Q53GS9	565 aa	Known RBP	13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	XKR5	Q6UX68	686 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	DCDC5	Q6ZRR9	648 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	CHST15	Q7LFX5	561 aa	Predicted RBP	13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	MSRB3	Q8IXL7	192 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	KLHDC8A	Q8IYD2	350 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	TMEM132C	Q8N3T6	1108 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	CPA6	Q8N4T0	437 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	L3MBTL4	Q8NA19	623 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	FKBP10	Q96AY3	582 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	ITCH	Q96J02	903 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	OR52E6	Q96RD3	313 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	CCM2	Q9BSQ5	444 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	WRAP53	Q9BUR4	548 aa	Known RBP	13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	AMBRA1	Q9C0C7	1298 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	GABARAPL1	Q9H0R8	117 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	NKX2-4	Q9H2Z4	354 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	TRIT1	Q9H3H1	467 aa	Known RBP	13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	CARS2	Q9HA77	564 aa	Known RBP	13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	ZFP14	Q9HCL3	533 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	FARSB	Q9NSD9	589 aa	Known RBP	13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	SLC25A37	Q9NYZ2	338 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	KL	Q9UEF7	1012 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	HCN2	Q9UL51	889 aa		13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	ZNF490	Q9ULM2	529 aa	Predicted RBP	13.81	□□□□□ -0.2
RANBP3-229	ENST00000592771	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	FFAR3	O14843	346 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	GPR42	O15529	346 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	SEC22B	O75396	215 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	PRKD3	O94806	890 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	ADRB3	P13945	408 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	DCT	P40126	519 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	MAGEA2	P43356	314 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	RGS19	P49795	217 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	GZMM	P51124	257 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	CXCR4	P61073	352 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	KCNC4	Q03721	635 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	DPT	Q07507	201 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	ABHD18	Q0P651	414 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	TMEM115	Q12893	351 aa	Predicted RBP	13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	RUNX3	Q13761	415 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	PTGR1	Q14914	329 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	NKG7	Q16617	165 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	PTCHD3	Q3KNS1	767 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	BCL7A	Q4VC05	210 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	SPANXN4	Q5MJ08	99 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	NEK5	Q6P3R8	708 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	SYCE2	Q6PIF2	218 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	PGBD3	Q8N328	593 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	ARL10	Q8N8L6	244 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	PIK3C3	Q8NEB9	887 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	SKA2	Q8WVK7	121 aa	Predicted RBP	13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	PPP1R16A	Q96I34	528 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	REXO5	Q96IC2	774 aa	Known RBP	13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	MAGEB10	Q96LZ2	347 aa	Predicted RBP	13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	NODAL	Q96S42	347 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	ZNF347	Q96SE7	839 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	SMURF2	Q9HAU4	748 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	THAP10	Q9P2Z0	257 aa	Predicted RBP	13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	ENPP5	Q9UJA9	477 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	TMED5	Q9Y3A6	229 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	SERTM1	A2A2V5	107 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	ARHGEF33	A8MVX0	844 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	B4GAT1	O43505	415 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	LILRB5	O75023	590 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	OCM2	P0CE71	109 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	OCM	P0CE72	109 aa	Predicted RBP	13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	POR	P16435	677 aa	Predicted RBP	13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	GJA4	P35212	333 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	MAPK9	P45984	424 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	CD47	Q08722	323 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	ANKDD1A	Q495B1	522 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	NIPAL1	Q6NVV3	410 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	SHQ1	Q6PI26	577 aa	Known RBP	13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	SPESP1	Q6UW49	350 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	RGL4	Q8IZJ4	473 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	FAM86B1	Q8N7N1	296 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	BPIFB6	Q8NFQ5	453 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	TESC	Q96BS2	214 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	NUS1	Q96E22	293 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	FAM120B	Q96EK7	910 aa	Known RBP	13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	CHFR	Q96EP1	664 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	PYURF	Q96I23	114 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	DNAJC11	Q9NVH1	559 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	BAG5	Q9UL15	447 aa		13.8	□□□□□ -0.2
RANBP3-229	ENST00000592771	SAMD4A	Q9UPU9	718 aa	Known RBP	13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms