RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 COILP38432 576 aaPredicted RBP17.9■□□□□ 0.46
CCDC43-205ENST00000592333 TSTA3Q13630 321 aaPredicted RBP17.9■□□□□ 0.46
CCDC43-205ENST00000592333 PTK6Q13882 451 aa17.9■□□□□ 0.46
CCDC43-205ENST00000592333 THEMIS2Q5TEJ8 643 aa17.9■□□□□ 0.46
CCDC43-205ENST00000592333 TTC27Q6P3X3 843 aa17.9■□□□□ 0.46
CCDC43-205ENST00000592333 ZNF549Q6P9A3 640 aa17.9■□□□□ 0.46
CCDC43-205ENST00000592333 CCDC137Q6PK04 289 aaKnown RBP17.9■□□□□ 0.46
CCDC43-205ENST00000592333 LINC00696Q6ZRV3 163 aa17.9■□□□□ 0.46
CCDC43-205ENST00000592333 DENND6AQ8IWF6 608 aa17.9■□□□□ 0.46
CCDC43-205ENST00000592333 PRSS58Q8IYP2 241 aa17.9■□□□□ 0.46
CCDC43-205ENST00000592333 CD200R1Q8TD46 325 aa17.9■□□□□ 0.46
CCDC43-205ENST00000592333 C8orf44Q96CB5 159 aa17.9■□□□□ 0.46
CCDC43-205ENST00000592333 SIGLEC10Q96LC7 697 aa17.9■□□□□ 0.46
CCDC43-205ENST00000592333 CCDC138Q96M89 665 aa17.9■□□□□ 0.46
CCDC43-205ENST00000592333 SLC30A3Q99726 388 aa17.9■□□□□ 0.46
CCDC43-205ENST00000592333 YIPF2Q9BWQ6 316 aa17.9■□□□□ 0.46
CCDC43-205ENST00000592333 C20orf96Q9NUD7 363 aaPredicted RBP17.9■□□□□ 0.46
CCDC43-205ENST00000592333 PCYOX1Q9UHG3 505 aa17.9■□□□□ 0.46
CCDC43-205ENST00000592333 FBXO5Q9UKT4 447 aa17.9■□□□□ 0.46
CCDC43-205ENST00000592333 CENPEQ02224 2701 aa17.89■□□□□ 0.45
CCDC43-205ENST00000592333 SLC16A5O15375 505 aa17.89■□□□□ 0.45
CCDC43-205ENST00000592333 WFS1O76024 890 aa17.89■□□□□ 0.45
CCDC43-205ENST00000592333 SYF2O95926 243 aaKnown RBP17.89■□□□□ 0.45
CCDC43-205ENST00000592333 C8GP07360 202 aa17.89■□□□□ 0.45
CCDC43-205ENST00000592333 STSP08842 583 aa17.89■□□□□ 0.45
CCDC43-205ENST00000592333 IMPA1P29218 277 aa17.89■□□□□ 0.45
CCDC43-205ENST00000592333 SLC1A2P43004 574 aa17.89■□□□□ 0.45
CCDC43-205ENST00000592333 FNTAP49354 379 aa17.89■□□□□ 0.45
CCDC43-205ENST00000592333 SP140Q13342 867 aa17.89■□□□□ 0.45
CCDC43-205ENST00000592333 ZNF324BQ6AW86 544 aaPredicted RBP17.89■□□□□ 0.45
CCDC43-205ENST00000592333 HIST2H2BCQ6DN03 193 aa17.89■□□□□ 0.45
CCDC43-205ENST00000592333 UBE2R2Q712K3 238 aaPredicted RBP17.89■□□□□ 0.45
CCDC43-205ENST00000592333 LURAP1LQ8IV03 231 aa17.89■□□□□ 0.45
CCDC43-205ENST00000592333 NAT8LQ8N9F0 302 aa17.89■□□□□ 0.45
CCDC43-205ENST00000592333 OR1N1Q8NGS0 311 aa17.89■□□□□ 0.45
CCDC43-205ENST00000592333 GPR21Q99679 349 aa17.89■□□□□ 0.45
CCDC43-205ENST00000592333 NAT9Q9BTE0 207 aa17.89■□□□□ 0.45
CCDC43-205ENST00000592333 CCDC177Q9NQR7 707 aaPredicted RBP17.89■□□□□ 0.45
CCDC43-205ENST00000592333 FBXO6Q9NRD1 293 aaPredicted RBP17.89■□□□□ 0.45
CCDC43-205ENST00000592333 OLAHQ9NV23 265 aa17.89■□□□□ 0.45
CCDC43-205ENST00000592333 TEKT2Q9UIF3 430 aa17.89■□□□□ 0.45
CCDC43-205ENST00000592333 TSR3Q9UJK0 312 aaKnown RBP17.89■□□□□ 0.45
CCDC43-205ENST00000592333 ITPR2Q14571 2701 aa17.88■□□□□ 0.45
CCDC43-205ENST00000592333 MDC1Q14676 2089 aaKnown RBP17.88■□□□□ 0.45
CCDC43-205ENST00000592333 H7BY64 318 aa17.88■□□□□ 0.45
CCDC43-205ENST00000592333 TTC4O95801 387 aa17.88■□□□□ 0.45
CCDC43-205ENST00000592333 IL10P22301 178 aa17.88■□□□□ 0.45
CCDC43-205ENST00000592333 RGS4P49798 205 aa17.88■□□□□ 0.45
CCDC43-205ENST00000592333 CCZ1BP86790 482 aa17.88■□□□□ 0.45
CCDC43-205ENST00000592333 CCZ1P86791 482 aaPredicted RBP17.88■□□□□ 0.45
CCDC43-205ENST00000592333 CUL1Q13616 776 aa17.88■□□□□ 0.45
CCDC43-205ENST00000592333 ADCK2Q7Z695 626 aa17.88■□□□□ 0.45
CCDC43-205ENST00000592333 GALNT7Q86SF2 657 aa17.88■□□□□ 0.45
CCDC43-205ENST00000592333 ZC3H7AQ8IWR0 971 aaKnown RBP17.88■□□□□ 0.45
CCDC43-205ENST00000592333 PALM2Q8IXS6 379 aa17.88■□□□□ 0.45
CCDC43-205ENST00000592333 PPIL6Q8IXY8 311 aa17.88■□□□□ 0.45
CCDC43-205ENST00000592333 PIP4P2Q8N4L2 257 aa17.88■□□□□ 0.45
CCDC43-205ENST00000592333 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.88■□□□□ 0.45
CCDC43-205ENST00000592333 PPFIBP2Q8ND30 876 aa17.88■□□□□ 0.45
CCDC43-205ENST00000592333 CATSPER1Q8NEC5 780 aa17.88■□□□□ 0.45
CCDC43-205ENST00000592333 DNAJB8Q8NHS0 232 aa17.88■□□□□ 0.45
CCDC43-205ENST00000592333 ACTRT1Q8TDG2 376 aa17.88■□□□□ 0.45
CCDC43-205ENST00000592333 BRIX1Q8TDN6 353 aaKnown RBP17.88■□□□□ 0.45
CCDC43-205ENST00000592333 METTL21AQ8WXB1 218 aa17.88■□□□□ 0.45
CCDC43-205ENST00000592333 IMMP1LQ96LU5 166 aa17.88■□□□□ 0.45
CCDC43-205ENST00000592333 PRAP1Q96NZ9 151 aa17.88■□□□□ 0.45
CCDC43-205ENST00000592333 AARSD1Q9BTE6 412 aaKnown RBP17.88■□□□□ 0.45
CCDC43-205ENST00000592333 SYNPO2LQ9H987 977 aa17.88■□□□□ 0.45
CCDC43-205ENST00000592333 PTGFRNQ9P2B2 879 aa17.88■□□□□ 0.45
CCDC43-205ENST00000592333 STOX2Q9P2F5 926 aaPredicted RBP17.88■□□□□ 0.45
CCDC43-205ENST00000592333 C19orf25Q9UFG5 118 aaPredicted RBP17.88■□□□□ 0.45
CCDC43-205ENST00000592333 MKL2Q9ULH7 1088 aa17.88■□□□□ 0.45
CCDC43-205ENST00000592333 MAD1L1Q9Y6D9 718 aa17.88■□□□□ 0.45
CCDC43-205ENST00000592333 A0A0A6YYC8 382 aaPredicted RBP17.87■□□□□ 0.45
CCDC43-205ENST00000592333 I3L1I5 382 aaPredicted RBP17.87■□□□□ 0.45
CCDC43-205ENST00000592333 PGRMC1O00264 195 aaKnown RBP17.87■□□□□ 0.45
CCDC43-205ENST00000592333 CES2O00748 559 aa17.87■□□□□ 0.45
CCDC43-205ENST00000592333 CDK2AP1O14519 115 aa17.87■□□□□ 0.45
CCDC43-205ENST00000592333 HAT1O14929 419 aa17.87■□□□□ 0.45
CCDC43-205ENST00000592333 HAUS5O94927 633 aa17.87■□□□□ 0.45
CCDC43-205ENST00000592333 C8orf89P0DMQ9 161 aa17.87■□□□□ 0.45
CCDC43-205ENST00000592333 PGAM1P18669 254 aa17.87■□□□□ 0.45
CCDC43-205ENST00000592333 DCTP40126 519 aa17.87■□□□□ 0.45
CCDC43-205ENST00000592333 PCOLCEQ15113 449 aa17.87■□□□□ 0.45
CCDC43-205ENST00000592333 KIAA0408Q6ZU52 694 aa17.87■□□□□ 0.45
CCDC43-205ENST00000592333 CAMKVQ8NCB2 501 aa17.87■□□□□ 0.45
CCDC43-205ENST00000592333 TM4SF19Q96DZ7 209 aa17.87■□□□□ 0.45
CCDC43-205ENST00000592333 PARVBQ9HBI1 364 aa17.87■□□□□ 0.45
CCDC43-205ENST00000592333 TAS2R13Q9NYV9 303 aa17.87■□□□□ 0.45
CCDC43-205ENST00000592333 TRMT6Q9UJA5 497 aaKnown RBP17.87■□□□□ 0.45
CCDC43-205ENST00000592333 PCDHGB6Q9Y5F9 930 aa17.87■□□□□ 0.45
CCDC43-205ENST00000592333 GOLGA6L10A0A0M3HER8 536 aa17.86■□□□□ 0.45
CCDC43-205ENST00000592333 GOLGA8MH3BSY2 632 aa17.86■□□□□ 0.45
CCDC43-205ENST00000592333 LRRTM2O43300 516 aa17.86■□□□□ 0.45
CCDC43-205ENST00000592333 JRKO75564 520 aa17.86■□□□□ 0.45
CCDC43-205ENST00000592333 CRYABP02511 175 aaKnown RBP17.86■□□□□ 0.45
CCDC43-205ENST00000592333 GRK3P35626 688 aa17.86■□□□□ 0.45
CCDC43-205ENST00000592333 AGTR2P50052 363 aa17.86■□□□□ 0.45
CCDC43-205ENST00000592333 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.86■□□□□ 0.45
CCDC43-205ENST00000592333 HSP90AA5PQ58FG0 334 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms