RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 MFAP5Q13361 173 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 ZNF169Q14929 603 aaPredicted RBP9.9□□□□□ -0.82
VPS4B-207ENST00000591519 ACSBG2Q5FVE4 666 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.9□□□□□ -0.82
VPS4B-207ENST00000591519 GARNL3Q5VVW2 1013 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 KIAA0930Q6ICG6 404 aaPredicted RBP9.9□□□□□ -0.82
VPS4B-207ENST00000591519 ZNF425Q6IV72 752 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 NEPROQ6NW34 567 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 CASC4Q6P4E1 433 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 NDUFAF7Q7L592 441 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 PAQR7Q86WK9 346 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 CILP2Q8IUL8 1156 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 DTWD1Q8N5C7 304 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 OTUD6BQ8N6M0 293 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 RNF217Q8TC41 542 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 GRHL3Q8TE85 626 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 HAS2Q92819 552 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 THOC3Q96J01 351 aaKnown RBP9.9□□□□□ -0.82
VPS4B-207ENST00000591519 C10orf90Q96M02 699 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 OR2A5Q96R48 311 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 KRT12Q99456 494 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 TRIM51Q9BSJ1 452 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 TRIM31Q9BZY9 425 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 TGIF2Q9GZN2 237 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 EPS8L2Q9H6S3 715 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 FAM114A2Q9NRY5 505 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 INTS10Q9NVR2 710 aaKnown RBP9.9□□□□□ -0.82
VPS4B-207ENST00000591519 GALPQ9UBC7 116 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 C3orf18Q9UK00 162 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 CRYL1Q9Y2S2 319 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 ZGRF1Q86YA3 2104 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 LOC102723996A0A087X1L8 192 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 GOLGA8KD6RF30 607 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 E7ENX8 843 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 GOLGA8TH3BQL2 631 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 GFYI3L273 518 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 E2F3O00716 465 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 TXNDC9O14530 226 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 MAP2K7O14733 419 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 PRPF4O43172 522 aaKnown RBP eCLIP9.89□□□□□ -0.83
VPS4B-207ENST00000591519 USP1O94782 785 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 MLNP12872 115 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 ACPPP15309 386 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 DCTP40126 519 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 CLCN7P51798 805 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 EMP2P54851 167 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 ABATP80404 500 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 SARNPP82979 210 aaKnown RBP9.89□□□□□ -0.83
VPS4B-207ENST00000591519 TAP2Q03519 686 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 CDC16Q13042 620 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 FAM53BQ14153 422 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 KLHL38Q2WGJ6 581 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 VWA2Q5GFL6 755 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 ZNF324BQ6AW86 544 aaPredicted RBP9.89□□□□□ -0.83
VPS4B-207ENST00000591519 CYHR1Q6ZMK1 362 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 CAND1Q86VP6 1230 aaKnown RBP9.89□□□□□ -0.83
VPS4B-207ENST00000591519 KBTBD2Q8IY47 623 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 METTL27Q8N6F8 245 aaPredicted RBP9.89□□□□□ -0.83
VPS4B-207ENST00000591519 AMER3Q8N944 861 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 CATSPER1Q8NEC5 780 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 ASB11Q8WXH4 323 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 TRIM44Q96DX7 344 aaPredicted RBP9.89□□□□□ -0.83
VPS4B-207ENST00000591519 PKP4Q99569 1192 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 MESP1Q9BRJ9 268 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 SYNPO2LQ9H987 977 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 MRPS30Q9NP92 439 aaKnown RBP9.89□□□□□ -0.83
VPS4B-207ENST00000591519 UTP6Q9NYH9 597 aaKnown RBP9.89□□□□□ -0.83
VPS4B-207ENST00000591519 NEU2Q9Y3R4 380 aa9.89□□□□□ -0.83
VPS4B-207ENST00000591519 NSG1A0A0A6YYJ2 146 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 FAM237BA0A1B0GVD1 139 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 SDR42E2A6NKP2 422 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 ZNF839A8K0R7 811 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 IDSB3KWA1 339 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 TTI1O43156 1089 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 FOXS1O43638 330 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 VPS26AO75436 327 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 BANF1O75531 89 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 CCNDBP1O95273 360 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 BMP10O95393 424 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 SLC16A8O95907 504 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 CATP04040 527 aaKnown RBP9.88□□□□□ -0.83
VPS4B-207ENST00000591519 EIF2S1P05198 315 aaKnown RBP9.88□□□□□ -0.83
VPS4B-207ENST00000591519 SERPINA7P05543 415 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 STSP08842 583 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 PRR35P0CG20 571 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 ERVK-10P10266 1014 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 COX6A1P12074 109 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 EZRP15311 586 aaKnown RBP9.88□□□□□ -0.83
VPS4B-207ENST00000591519 PAMP19021 973 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 FBLP22087 321 aaKnown RBP9.88□□□□□ -0.83
VPS4B-207ENST00000591519 COL8A1P27658 744 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 RPA3P35244 121 aaPredicted RBP9.88□□□□□ -0.83
VPS4B-207ENST00000591519 SOX11P35716 441 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 SKIV2L2P42285 1042 aaKnown RBP9.88□□□□□ -0.83
VPS4B-207ENST00000591519 PNLIPRP1P54315 467 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 DR1Q01658 176 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 PTK6Q13882 451 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 ICE2Q659A1 982 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 TMEM205Q6UW68 189 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 SUSD1Q6UWL2 747 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms