RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 LONRF1Q17RB8 773 aa13.32□□□□□ -0.28
DNMT1-213ENST00000587604 SYT16Q17RD7 645 aa13.32□□□□□ -0.28
DNMT1-213ENST00000587604 ZXDCQ2QGD7 858 aaPredicted RBP13.32□□□□□ -0.28
DNMT1-213ENST00000587604 TYSND1Q2T9J0 566 aa13.32□□□□□ -0.28
DNMT1-213ENST00000587604 KLHL38Q2WGJ6 581 aa13.32□□□□□ -0.28
DNMT1-213ENST00000587604 ACSBG2Q5FVE4 666 aa13.32□□□□□ -0.28
DNMT1-213ENST00000587604 METTL21AQ8WXB1 218 aa13.32□□□□□ -0.28
DNMT1-213ENST00000587604 FAM136AQ96C01 138 aa13.32□□□□□ -0.28
DNMT1-213ENST00000587604 PKP4Q99569 1192 aa13.32□□□□□ -0.28
DNMT1-213ENST00000587604 GALPQ9UBC7 116 aa13.32□□□□□ -0.28
DNMT1-213ENST00000587604 TAC3Q9UHF0 121 aa13.32□□□□□ -0.28
DNMT1-213ENST00000587604 CRYL1Q9Y2S2 319 aa13.32□□□□□ -0.28
DNMT1-213ENST00000587604 ADGRG4Q8IZF6 3080 aa13.31□□□□□ -0.28
DNMT1-213ENST00000587604 GOLGA8KD6RF30 607 aa13.31□□□□□ -0.28
DNMT1-213ENST00000587604 GOLGA8TH3BQL2 631 aa13.31□□□□□ -0.28
DNMT1-213ENST00000587604 CYC1P08574 325 aa13.31□□□□□ -0.28
DNMT1-213ENST00000587604 AVPR1BP47901 424 aa13.31□□□□□ -0.28
DNMT1-213ENST00000587604 EFNA3P52797 238 aa13.31□□□□□ -0.28
DNMT1-213ENST00000587604 CASP6P55212 293 aa13.31□□□□□ -0.28
DNMT1-213ENST00000587604 ABATP80404 500 aa13.31□□□□□ -0.28
DNMT1-213ENST00000587604 SRSF11Q05519 484 aaKnown RBP13.31□□□□□ -0.28
DNMT1-213ENST00000587604 CCNG2Q16589 344 aa13.31□□□□□ -0.28
DNMT1-213ENST00000587604 NDUFA9Q16795 377 aa13.31□□□□□ -0.28
DNMT1-213ENST00000587604 DRICH1Q6PGQ1 229 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-213ENST00000587604 XKRXQ6PP77 449 aa13.31□□□□□ -0.28
DNMT1-213ENST00000587604 CES3Q6UWW8 571 aa13.31□□□□□ -0.28
DNMT1-213ENST00000587604 GDF7Q7Z4P5 450 aa13.31□□□□□ -0.28
DNMT1-213ENST00000587604 TMEM139Q8IV31 216 aa13.31□□□□□ -0.28
DNMT1-213ENST00000587604 AMER2Q8N7J2 671 aa13.31□□□□□ -0.28
DNMT1-213ENST00000587604 DESI2Q9BSY9 194 aa13.31□□□□□ -0.28
DNMT1-213ENST00000587604 PCYOX1Q9UHG3 505 aa13.31□□□□□ -0.28
DNMT1-213ENST00000587604 PCDHGB6Q9Y5F9 930 aa13.31□□□□□ -0.28
DNMT1-213ENST00000587604 E5RI56 91 aa13.3□□□□□ -0.28
DNMT1-213ENST00000587604 E7ENX8 843 aa13.3□□□□□ -0.28
DNMT1-213ENST00000587604 H0YIG0 161 aa13.3□□□□□ -0.28
DNMT1-213ENST00000587604 P2RX6O15547 441 aa13.3□□□□□ -0.28
DNMT1-213ENST00000587604 SLC16A8O95907 504 aa13.3□□□□□ -0.28
DNMT1-213ENST00000587604 OGNP20774 298 aaKnown RBP13.3□□□□□ -0.28
DNMT1-213ENST00000587604 MGAT1P26572 445 aa13.3□□□□□ -0.28
DNMT1-213ENST00000587604 BASP1P80723 227 aaKnown RBP13.3□□□□□ -0.28
DNMT1-213ENST00000587604 MAT1AQ00266 395 aaKnown RBP13.3□□□□□ -0.28
DNMT1-213ENST00000587604 CDK16Q00536 496 aa13.3□□□□□ -0.28
DNMT1-213ENST00000587604 TAP2Q03519 686 aa13.3□□□□□ -0.28
DNMT1-213ENST00000587604 ZNF766Q5HY98 468 aa13.3□□□□□ -0.28
DNMT1-213ENST00000587604 PLAG1Q6DJT9 500 aa13.3□□□□□ -0.28
DNMT1-213ENST00000587604 H3F3CQ6NXT2 135 aa13.3□□□□□ -0.28
DNMT1-213ENST00000587604 NEK10Q6ZWH5 1172 aa13.3□□□□□ -0.28
DNMT1-213ENST00000587604 CPEB2Q7Z5Q1 589 aaKnown RBP13.3□□□□□ -0.28
DNMT1-213ENST00000587604 REXO1L1PQ8IX06 675 aa13.3□□□□□ -0.28
DNMT1-213ENST00000587604 FBXO15Q8NCQ5 510 aaPredicted RBP13.3□□□□□ -0.28
DNMT1-213ENST00000587604 PPFIBP2Q8ND30 876 aa13.3□□□□□ -0.28
DNMT1-213ENST00000587604 ZNF480Q8WV37 535 aa13.3□□□□□ -0.28
DNMT1-213ENST00000587604 ZNF354BQ96LW1 612 aa13.3□□□□□ -0.28
DNMT1-213ENST00000587604 CYTH2Q99418 400 aa13.3□□□□□ -0.28
DNMT1-213ENST00000587604 EBNA1BP2Q99848 306 aaKnown RBP13.3□□□□□ -0.28
DNMT1-213ENST00000587604 TSGA10Q9BZW7 698 aa13.3□□□□□ -0.28
DNMT1-213ENST00000587604 VN1R1Q9GZP7 353 aa13.3□□□□□ -0.28
DNMT1-213ENST00000587604 SYBUQ9NX95 663 aa13.3□□□□□ -0.28
DNMT1-213ENST00000587604 SOX13Q9UN79 622 aa13.3□□□□□ -0.28
DNMT1-213ENST00000587604 VPS9D1Q9Y2B5 631 aa13.3□□□□□ -0.28
DNMT1-213ENST00000587604 CELSR1Q9NYQ6 3014 aa13.3□□□□□ -0.28
DNMT1-213ENST00000587604 SETD2Q9BYW2 2564 aaPredicted RBP13.29□□□□□ -0.28
DNMT1-213ENST00000587604 HIVEP1P15822 2718 aa13.29□□□□□ -0.28
DNMT1-213ENST00000587604 A8MUI8 341 aa13.29□□□□□ -0.28
DNMT1-213ENST00000587604 SMAPO00193 183 aa13.29□□□□□ -0.28
DNMT1-213ENST00000587604 HAT1O14929 419 aa13.29□□□□□ -0.28
DNMT1-213ENST00000587604 SLC19A2O60779 497 aa13.29□□□□□ -0.28
DNMT1-213ENST00000587604 SEC24DO94855 1032 aaPredicted RBP13.29□□□□□ -0.28
DNMT1-213ENST00000587604 COX6B1P14854 86 aa13.29□□□□□ -0.28
DNMT1-213ENST00000587604 AGAP20933 346 aa13.29□□□□□ -0.28
DNMT1-213ENST00000587604 CLCN7P51798 805 aa13.29□□□□□ -0.28
DNMT1-213ENST00000587604 KCNJ11Q14654 390 aa13.29□□□□□ -0.28
DNMT1-213ENST00000587604 SIX1Q15475 284 aaPredicted RBP13.29□□□□□ -0.28
DNMT1-213ENST00000587604 TTLL9Q3SXZ7 439 aa13.29□□□□□ -0.28
DNMT1-213ENST00000587604 CENPUQ71F23 418 aa13.29□□□□□ -0.28
DNMT1-213ENST00000587604 ADCK2Q7Z695 626 aa13.29□□□□□ -0.28
DNMT1-213ENST00000587604 CILP2Q8IUL8 1156 aa13.29□□□□□ -0.28
DNMT1-213ENST00000587604 OR9A4Q8NGU2 314 aa13.29□□□□□ -0.28
DNMT1-213ENST00000587604 MCOLN3Q8TDD5 553 aa13.29□□□□□ -0.28
DNMT1-213ENST00000587604 ASB11Q8WXH4 323 aa13.29□□□□□ -0.28
DNMT1-213ENST00000587604 LURAP1Q96LR2 239 aa13.29□□□□□ -0.28
DNMT1-213ENST00000587604 KLHL42Q9P2K6 505 aa13.29□□□□□ -0.28
DNMT1-213ENST00000587604 C19orf25Q9UFG5 118 aaPredicted RBP13.29□□□□□ -0.28
DNMT1-213ENST00000587604 SH3BGRL2Q9UJC5 107 aa13.29□□□□□ -0.28
DNMT1-213ENST00000587604 MED13LQ71F56 2210 aa13.28□□□□□ -0.28
DNMT1-213ENST00000587604 KCNE1BA0A087WTH5 132 aa13.28□□□□□ -0.28
DNMT1-213ENST00000587604 IGHV3-20A0A0C4DH32 117 aa13.28□□□□□ -0.28
DNMT1-213ENST00000587604 H7BY64 318 aa13.28□□□□□ -0.28
DNMT1-213ENST00000587604 GFYI3L273 518 aa13.28□□□□□ -0.28
DNMT1-213ENST00000587604 ZBTB14O43829 449 aa13.28□□□□□ -0.28
DNMT1-213ENST00000587604 WISP2O76076 250 aa13.28□□□□□ -0.28
DNMT1-213ENST00000587604 NSA2O95478 260 aaKnown RBP13.28□□□□□ -0.28
DNMT1-213ENST00000587604 SNRPB2P08579 225 aaKnown RBP13.28□□□□□ -0.28
DNMT1-213ENST00000587604 ESRRAP11474 423 aaPredicted RBP13.28□□□□□ -0.28
DNMT1-213ENST00000587604 TPSB2P20231 275 aa13.28□□□□□ -0.28
DNMT1-213ENST00000587604 HRH2P25021 359 aa13.28□□□□□ -0.28
DNMT1-213ENST00000587604 SNRPNP63162 240 aaKnown RBP13.28□□□□□ -0.28
DNMT1-213ENST00000587604 PMP22Q01453 160 aa13.28□□□□□ -0.28
DNMT1-213ENST00000587604 PTK6Q13882 451 aa13.28□□□□□ -0.28
DNMT1-213ENST00000587604 TPSAB1Q15661 275 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms