RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 MED27Q6P2C8 311 aa19.68■□□□□ 0.74
ATG4D-204ENST00000586417 DCP2Q8IU60 420 aaKnown RBP19.68■□□□□ 0.74
ATG4D-204ENST00000586417 CAMK1GQ96NX5 476 aa19.68■□□□□ 0.74
ATG4D-204ENST00000586417 SLC39A3Q9BRY0 314 aa19.68■□□□□ 0.74
ATG4D-204ENST00000586417 SPNS1Q9H2V7 528 aa19.68■□□□□ 0.74
ATG4D-204ENST00000586417 BRF2Q9HAW0 419 aa19.68■□□□□ 0.74
ATG4D-204ENST00000586417 FSCN3Q9NQT6 498 aa19.68■□□□□ 0.74
ATG4D-204ENST00000586417 SCHIP1Q9P0W5 487 aaPredicted RBP19.68■□□□□ 0.74
ATG4D-204ENST00000586417 TMED5Q9Y3A6 229 aa19.68■□□□□ 0.74
ATG4D-204ENST00000586417 ADAMTS9Q9P2N4 1935 aa19.68■□□□□ 0.74
ATG4D-204ENST00000586417 A0A1W2PPV9 198 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 DYTNA2CJ06 578 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 KRT36O76013 467 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 RASGRP1O95267 797 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 GNSP15586 552 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 DDX39BQ13838 428 aaKnown RBP19.67■□□□□ 0.74
ATG4D-204ENST00000586417 RPE65Q16518 533 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 PAGE3Q5JUK9 113 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 THEMIS2Q5TEJ8 643 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 PARGQ86W56 976 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 LAS2Q8IYD9 372 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 LINC01555Q8NAE3 123 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 HUS1BQ8NHY5 278 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 HAUS8Q9BT25 410 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 SPAG4Q9NPE6 437 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 TMEM181Q9P2C4 612 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 VPS29Q9UBQ0 182 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 TBC1D29Q9UFV1 150 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 LEF1Q9UJU2 399 aaPredicted RBP19.67■□□□□ 0.74
ATG4D-204ENST00000586417 DGKBQ9Y6T7 804 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 PCM1Q15154 2024 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 MUC6Q6W4X9 2439 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 PIPSLA2A3N6 862 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 MAGEB17A8MXT2 336 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 PATE3B3GLJ2 98 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 PSMG1O95456 288 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 ETHE1O95571 254 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 LMNAP02545 664 aaKnown RBP19.67■□□□□ 0.74
ATG4D-204ENST00000586417 XRCC1P18887 633 aaPredicted RBP19.67■□□□□ 0.74
ATG4D-204ENST00000586417 C21orf59P57076 290 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 YBX1P67809 324 aaKnown RBP19.67■□□□□ 0.74
ATG4D-204ENST00000586417 CCNIQ14094 377 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 PEAR1Q5VY43 1037 aaPredicted RBP19.67■□□□□ 0.74
ATG4D-204ENST00000586417 RNF148Q8N7C7 305 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 SMPDL3AQ92484 453 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 C11orf24Q96F05 449 aaPredicted RBP19.67■□□□□ 0.74
ATG4D-204ENST00000586417 MVB12BQ9H7P6 319 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 DCLRE1BQ9H816 532 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 SNX11Q9Y5W9 270 aa19.67■□□□□ 0.74
ATG4D-204ENST00000586417 ZNF839A8K0R7 811 aa19.66■□□□□ 0.74
ATG4D-204ENST00000586417 EML2O95834 649 aa19.66■□□□□ 0.74
ATG4D-204ENST00000586417 CELA2BP08218 269 aaPredicted RBP19.66■□□□□ 0.74
ATG4D-204ENST00000586417 PRPS2P11908 318 aa19.66■□□□□ 0.74
ATG4D-204ENST00000586417 CDH1P12830 882 aa19.66■□□□□ 0.74
ATG4D-204ENST00000586417 SDC1P18827 310 aa19.66■□□□□ 0.74
ATG4D-204ENST00000586417 TACR1P25103 407 aa19.66■□□□□ 0.74
ATG4D-204ENST00000586417 AK4P27144 223 aaPredicted RBP19.66■□□□□ 0.74
ATG4D-204ENST00000586417 CCDC6Q16204 474 aa19.66■□□□□ 0.74
ATG4D-204ENST00000586417 PAGE2BQ5JRK9 111 aa19.66■□□□□ 0.74
ATG4D-204ENST00000586417 ABRAXAS1Q6UWZ7 409 aa19.66■□□□□ 0.74
ATG4D-204ENST00000586417 WASH2PQ6VEQ5 465 aa19.66■□□□□ 0.74
ATG4D-204ENST00000586417 FAM129CQ86XR2 697 aa19.66■□□□□ 0.74
ATG4D-204ENST00000586417 PHACTR4Q8IZ21 702 aa19.66■□□□□ 0.74
ATG4D-204ENST00000586417 MINDY1Q8N5J2 469 aa19.66■□□□□ 0.74
ATG4D-204ENST00000586417 APOLD1Q96LR9 279 aa19.66■□□□□ 0.74
ATG4D-204ENST00000586417 HOPXQ9BPY8 73 aaPredicted RBP19.66■□□□□ 0.74
ATG4D-204ENST00000586417 ACAT2Q9BWD1 397 aa19.66■□□□□ 0.74
ATG4D-204ENST00000586417 DPY30Q9C005 99 aa19.66■□□□□ 0.74
ATG4D-204ENST00000586417 WASH6PQ9NQA3 447 aa19.66■□□□□ 0.74
ATG4D-204ENST00000586417 ADA2Q9NZK5 511 aa19.66■□□□□ 0.74
ATG4D-204ENST00000586417 TAC3Q9UHF0 121 aa19.66■□□□□ 0.74
ATG4D-204ENST00000586417 ARHGEF17Q96PE2 2063 aaPredicted RBP19.66■□□□□ 0.74
ATG4D-204ENST00000586417 CABIN1Q9Y6J0 2220 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 H0Y3Z8 333 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 TNFP01375 233 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 MTHFD1P11586 935 aaKnown RBP19.65■□□□□ 0.74
ATG4D-204ENST00000586417 PCNAP12004 261 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 ME2P23368 584 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 PKLRP30613 574 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 DGKQP52824 942 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 TEAD4Q15561 434 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 C10orf62Q5T681 223 aaPredicted RBP19.65■□□□□ 0.74
ATG4D-204ENST00000586417 NOXRED1Q6NXP6 359 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 KRTCAP2Q8N6L1 136 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 GLB1L3Q8NCI6 653 aaPredicted RBP19.65■□□□□ 0.74
ATG4D-204ENST00000586417 LRRC58Q96CX6 371 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 REPS1Q96D71 796 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 METTL2AQ96IZ6 378 aaKnown RBP19.65■□□□□ 0.74
ATG4D-204ENST00000586417 CLMPQ9H6B4 373 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 IL1RL2Q9HB29 575 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 GID8Q9NWU2 228 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 ABCD2Q9UBJ2 740 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 CD300AQ9UGN4 299 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 SUSD2Q9UGT4 822 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 PCOLCE2Q9UKZ9 415 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 L3MBTL1Q9Y468 752 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 PRAMEF33A0A0G2JMD5 474 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 TRIM38O00635 465 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 MAP3K7O43318 606 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 CSF2P04141 144 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms