RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 TICAM1Q8IUC6 712 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 RNF175Q8N4F7 328 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 VPS37AQ8NEZ2 397 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 ABHD11Q8NFV4 315 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 CANT1Q8WVQ1 401 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 NSMCE2Q96MF7 247 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 IL17FQ96PD4 163 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 INSM2Q96T92 566 aaPredicted RBP13.66□□□□□ -0.22
LIG3-205ENST00000585941 GAS2L1Q99501 681 aaPredicted RBP13.66□□□□□ -0.22
LIG3-205ENST00000585941 PHF7Q9BWX1 381 aaPredicted RBP13.66□□□□□ -0.22
LIG3-205ENST00000585941 EBPLQ9BY08 206 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 Q9H521 79 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 SERHLQ9NQF3 203 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 AHSPQ9NZD4 102 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 GMPR2Q9P2T1 348 aaKnown RBP13.66□□□□□ -0.22
LIG3-205ENST00000585941 MOSPD1Q9UJG1 213 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 ANAPC2Q9UJX6 822 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 SH2B3Q9UQQ2 575 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 GPSM3Q9Y4H4 160 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 NEUROG3Q9Y4Z2 214 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 PRSS38A1L453 326 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 RFXANKO14593 260 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 SCAMP2O15127 329 aaKnown RBP13.66□□□□□ -0.22
LIG3-205ENST00000585941 PCDH7O60245 1069 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 HNRNPA2B1P22626 353 aaKnown RBP13.66□□□□□ -0.22
LIG3-205ENST00000585941 RPL10P27635 214 aaKnown RBP13.66□□□□□ -0.22
LIG3-205ENST00000585941 HTR1BP28222 390 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 RAB28P51157 221 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 TPMTP51580 245 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 CCR8P51685 355 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 PPP2CBP62714 309 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 PPP2CAP67775 309 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 PHC1P78364 1004 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 KLC1Q07866 573 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 KRT33BQ14525 404 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 NFATC4Q14934 902 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 CYP51A1Q16850 503 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 DUOXA1Q1HG43 343 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 ANXA8L1Q5VT79 327 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 GLYATQ6IB77 296 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 ERMP1Q7Z2K6 904 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 FAM124AQ86V42 546 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 TRPV3Q8NET8 790 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 OR2T12Q8NG77 320 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 OR52E4Q8NGH9 312 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 PPWD1Q96BP3 646 aaKnown RBP13.66□□□□□ -0.22
LIG3-205ENST00000585941 EGLN2Q96KS0 407 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 ZNF583Q96ND8 569 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 CAMK1GQ96NX5 476 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 OR2M4Q96R27 311 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 MENTQ9BUN1 341 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 TRIM8Q9BZR9 551 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 RHBGQ9H310 441 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 GORASP2Q9H8Y8 452 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 SLC2A4RGQ9NR83 387 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 SLC25A37Q9NYZ2 338 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 PLAGL1Q9UM63 463 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 INVSQ9Y283 1065 aa13.66□□□□□ -0.22
LIG3-205ENST00000585941 MYO10Q9HD67 2058 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 A0A1W2PPC1 479 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 GNG14A0A1W2PPG7 69 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 TCRBV5S2A0A599 114 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 TCRBV21S2A2A0A5A6 115 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 EVPLLA8MZ36 301 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 MAN2B1O00754 1011 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 TNFRSF10CO14798 259 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 GSTA4O15217 222 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 ETHE1O95571 254 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 ANXA6P08133 673 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 BMP2P12643 396 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 UQCRBP14927 111 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 GGT1P19440 569 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 NDUFS1P28331 727 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 POLE2P56282 527 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 OR4D2P58180 307 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 YPEL5P62699 121 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 RAE1P78406 368 aaKnown RBP13.65□□□□□ -0.22
LIG3-205ENST00000585941 PLIN5Q00G26 463 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 ZNF763Q0D2J5 394 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 UGT8Q16880 541 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 SFT2D3Q587I9 215 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 TMEM92Q6UXU6 159 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 WASH2PQ6VEQ5 465 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 R3HCC1LQ7Z5L2 792 aaKnown RBP13.65□□□□□ -0.22
LIG3-205ENST00000585941 MSRB3Q8IXL7 192 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 ADGRG5Q8IZF4 528 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 METTL4Q8N3J2 472 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 PAPD5Q8NDF8 572 aaKnown RBP13.65□□□□□ -0.22
LIG3-205ENST00000585941 OR2L8Q8NGY9 312 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 NUDT8Q8WV74 236 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 EME1Q96AY2 570 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 WDR92Q96MX6 357 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 CPPED1Q9BRF8 314 aaPredicted RBP13.65□□□□□ -0.22
LIG3-205ENST00000585941 REXO4Q9GZR2 422 aaKnown RBP13.65□□□□□ -0.22
LIG3-205ENST00000585941 POLMQ9NP87 494 aaPredicted RBP13.65□□□□□ -0.22
LIG3-205ENST00000585941 FZD3Q9NPG1 666 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 C8orf4Q9NR00 106 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 TAC3Q9UHF0 121 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 AURKCQ9UQB9 309 aa13.65□□□□□ -0.22
LIG3-205ENST00000585941 KCNK6Q9Y257 313 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms