RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 OXTRP30559 389 aa21.84■■□□□ 1.09
CCDC47-204ENST00000582252 TRIM23P36406 574 aa21.84■■□□□ 1.09
CCDC47-204ENST00000582252 HPCAL1P37235 193 aa21.84■■□□□ 1.09
CCDC47-204ENST00000582252 CHN2P52757 468 aa21.84■■□□□ 1.09
CCDC47-204ENST00000582252 FAM98BQ52LJ0 330 aaKnown RBP21.84■■□□□ 1.09
CCDC47-204ENST00000582252 METRNLQ641Q3 311 aa21.84■■□□□ 1.09
CCDC47-204ENST00000582252 PPP4R4Q6NUP7 873 aa21.84■■□□□ 1.09
CCDC47-204ENST00000582252 LPCAT2Q7L5N7 544 aa21.84■■□□□ 1.09
CCDC47-204ENST00000582252 ST13P4Q8IZP2 240 aaPredicted RBP21.84■■□□□ 1.09
CCDC47-204ENST00000582252 RNF175Q8N4F7 328 aa21.84■■□□□ 1.09
CCDC47-204ENST00000582252 DTWD1Q8N5C7 304 aa21.84■■□□□ 1.09
CCDC47-204ENST00000582252 TP53I13Q8NBR0 393 aaPredicted RBP21.84■■□□□ 1.09
CCDC47-204ENST00000582252 ZNF548Q8NEK5 533 aaPredicted RBP21.84■■□□□ 1.09
CCDC47-204ENST00000582252 OR8J2Q8NGG1 315 aa21.84■■□□□ 1.09
CCDC47-204ENST00000582252 OR52E4Q8NGH9 312 aa21.84■■□□□ 1.09
CCDC47-204ENST00000582252 OR10A6Q8NH74 314 aa21.84■■□□□ 1.09
CCDC47-204ENST00000582252 PRPF18Q99633 342 aaKnown RBP21.84■■□□□ 1.09
CCDC47-204ENST00000582252 CPPED1Q9BRF8 314 aaPredicted RBP21.84■■□□□ 1.09
CCDC47-204ENST00000582252 UGT2B28Q9BY64 529 aa21.84■■□□□ 1.09
CCDC47-204ENST00000582252 RMI1Q9H9A7 625 aa21.84■■□□□ 1.09
CCDC47-204ENST00000582252 SERHLQ9NQF3 203 aa21.84■■□□□ 1.09
CCDC47-204ENST00000582252 SPATA7Q9P0W8 599 aa21.84■■□□□ 1.09
CCDC47-204ENST00000582252 PRKAB1Q9Y478 270 aa21.84■■□□□ 1.09
CCDC47-204ENST00000582252 PCDHB14Q9Y5E9 798 aa21.84■■□□□ 1.09
CCDC47-204ENST00000582252 PLRG1O43660 514 aaKnown RBP21.83■■□□□ 1.09
CCDC47-204ENST00000582252 SLC35G4P0C7Q5 338 aa21.83■■□□□ 1.09
CCDC47-204ENST00000582252 PHC1P78364 1004 aa21.83■■□□□ 1.09
CCDC47-204ENST00000582252 DUOXA1Q1HG43 343 aa21.83■■□□□ 1.09
CCDC47-204ENST00000582252 EOGTQ5NDL2 527 aa21.83■■□□□ 1.09
CCDC47-204ENST00000582252 TMTC4Q5T4D3 741 aa21.83■■□□□ 1.09
CCDC47-204ENST00000582252 MSRB3Q8IXL7 192 aa21.83■■□□□ 1.09
CCDC47-204ENST00000582252 OR5K2Q8NHB8 316 aa21.83■■□□□ 1.09
CCDC47-204ENST00000582252 CHTF18Q8WVB6 975 aa21.83■■□□□ 1.09
CCDC47-204ENST00000582252 FAM131CQ96AQ9 280 aa21.83■■□□□ 1.09
CCDC47-204ENST00000582252 FAM120BQ96EK7 910 aaKnown RBP21.83■■□□□ 1.09
CCDC47-204ENST00000582252 C11orf24Q96F05 449 aaPredicted RBP21.83■■□□□ 1.09
CCDC47-204ENST00000582252 CIB1Q99828 191 aa21.83■■□□□ 1.09
CCDC47-204ENST00000582252 LGR4Q9BXB1 951 aa21.83■■□□□ 1.09
CCDC47-204ENST00000582252 TRIT1Q9H3H1 467 aaKnown RBP21.83■■□□□ 1.09
CCDC47-204ENST00000582252 SIRT5Q9NXA8 310 aa21.83■■□□□ 1.09
CCDC47-204ENST00000582252 WNT16Q9UBV4 365 aa21.83■■□□□ 1.09
CCDC47-204ENST00000582252 SERGEFQ9UGK8 458 aa21.83■■□□□ 1.09
CCDC47-204ENST00000582252 CA14Q9ULX7 337 aa21.83■■□□□ 1.09
CCDC47-204ENST00000582252 NDRG2Q9UN36 371 aaKnown RBP21.83■■□□□ 1.09
CCDC47-204ENST00000582252 TSC22D4Q9Y3Q8 395 aa21.83■■□□□ 1.09
CCDC47-204ENST00000582252 CROCCQ5TZA2 2017 aa21.83■■□□□ 1.09
CCDC47-204ENST00000582252 PIPSLA2A3N6 862 aa21.83■■□□□ 1.08
CCDC47-204ENST00000582252 EVPLLA8MZ36 301 aa21.83■■□□□ 1.08
CCDC47-204ENST00000582252 KCNJ13O60928 360 aa21.83■■□□□ 1.08
CCDC47-204ENST00000582252 MYCLP1P12525 358 aaPredicted RBP21.83■■□□□ 1.08
CCDC47-204ENST00000582252 CD72P21854 359 aa21.83■■□□□ 1.08
CCDC47-204ENST00000582252 TIA1P31483 386 aaKnown RBP eCLIP21.83■■□□□ 1.08
CCDC47-204ENST00000582252 RPS13P62277 151 aaKnown RBP21.83■■□□□ 1.08
CCDC47-204ENST00000582252 DMPKQ09013 629 aa21.83■■□□□ 1.08
CCDC47-204ENST00000582252 LRRC74AQ0VAA2 488 aa21.83■■□□□ 1.08
CCDC47-204ENST00000582252 CYP2A13Q16696 494 aa21.83■■□□□ 1.08
CCDC47-204ENST00000582252 CATSPEREQ5SY80 951 aa21.83■■□□□ 1.08
CCDC47-204ENST00000582252 MICU2Q8IYU8 434 aa21.83■■□□□ 1.08
CCDC47-204ENST00000582252 KRT78Q8N1N4 520 aa21.83■■□□□ 1.08
CCDC47-204ENST00000582252 C1orf52Q8N6N3 182 aaKnown RBP21.83■■□□□ 1.08
CCDC47-204ENST00000582252 VPS37AQ8NEZ2 397 aa21.83■■□□□ 1.08
CCDC47-204ENST00000582252 OR5AR1Q8NGP9 310 aa21.83■■□□□ 1.08
CCDC47-204ENST00000582252 RPLP0P6Q8NHW5 317 aa21.83■■□□□ 1.08
CCDC47-204ENST00000582252 CXorf40BQ96DE9 158 aa21.83■■□□□ 1.08
CCDC47-204ENST00000582252 EGLN2Q96KS0 407 aa21.83■■□□□ 1.08
CCDC47-204ENST00000582252 C1QTNF2Q9BXJ5 285 aa21.83■■□□□ 1.08
CCDC47-204ENST00000582252 PCBD2Q9H0N5 130 aa21.83■■□□□ 1.08
CCDC47-204ENST00000582252 KAT8Q9H7Z6 458 aaKnown RBP21.83■■□□□ 1.08
CCDC47-204ENST00000582252 MBNL1Q9NR56 388 aaKnown RBP21.83■■□□□ 1.08
CCDC47-204ENST00000582252 ZFR2Q9UPR6 939 aaKnown RBP21.83■■□□□ 1.08
CCDC47-204ENST00000582252 USP22Q9UPT9 525 aa21.83■■□□□ 1.08
CCDC47-204ENST00000582252 MRPS17Q9Y2R5 130 aaKnown RBP21.83■■□□□ 1.08
CCDC47-204ENST00000582252 TDRKHQ9Y2W6 561 aaKnown RBP21.83■■□□□ 1.08
CCDC47-204ENST00000582252 LDLRP01130 860 aa21.82■■□□□ 1.08
CCDC47-204ENST00000582252 ANXA4P09525 319 aaPredicted RBP21.82■■□□□ 1.08
CCDC47-204ENST00000582252 ERGP11308 486 aa21.82■■□□□ 1.08
CCDC47-204ENST00000582252 PIK3CBP42338 1070 aa21.82■■□□□ 1.08
CCDC47-204ENST00000582252 ABHD18Q0P651 414 aa21.82■■□□□ 1.08
CCDC47-204ENST00000582252 SFSWAPQ12872 951 aaKnown RBP21.82■■□□□ 1.08
CCDC47-204ENST00000582252 ATP6AP1Q15904 470 aa21.82■■□□□ 1.08
CCDC47-204ENST00000582252 NRF1Q16656 503 aa21.82■■□□□ 1.08
CCDC47-204ENST00000582252 OR4F3Q6IEY1 312 aa21.82■■□□□ 1.08
CCDC47-204ENST00000582252 KIAA1211LQ6NV74 962 aa21.82■■□□□ 1.08
CCDC47-204ENST00000582252 PHC3Q8NDX5 983 aa21.82■■□□□ 1.08
CCDC47-204ENST00000582252 OR14C36Q8NHC7 312 aa21.82■■□□□ 1.08
CCDC47-204ENST00000582252 GFM2Q969S9 779 aaKnown RBP21.82■■□□□ 1.08
CCDC47-204ENST00000582252 SHDQ96IW2 340 aa21.82■■□□□ 1.08
CCDC47-204ENST00000582252 TIMM29Q9BSF4 260 aa21.82■■□□□ 1.08
CCDC47-204ENST00000582252 REXO4Q9GZR2 422 aaKnown RBP21.82■■□□□ 1.08
CCDC47-204ENST00000582252 GEMIN8Q9NWZ8 242 aaKnown RBP21.82■■□□□ 1.08
CCDC47-204ENST00000582252 SLC23A2Q9UGH3 650 aa21.82■■□□□ 1.08
CCDC47-204ENST00000582252 ADGRE2Q9UHX3 823 aa21.82■■□□□ 1.08
CCDC47-204ENST00000582252 FBXL21Q9UKT6 434 aa21.82■■□□□ 1.08
CCDC47-204ENST00000582252 NCOR1O75376 2440 aa21.82■■□□□ 1.08
CCDC47-204ENST00000582252 A0A1W2PQF6 199 aa21.81■■□□□ 1.08
CCDC47-204ENST00000582252 SCAMP2O15127 329 aaKnown RBP21.81■■□□□ 1.08
CCDC47-204ENST00000582252 TPST1O60507 370 aa21.81■■□□□ 1.08
CCDC47-204ENST00000582252 PAK4O96013 591 aaPredicted RBP21.81■■□□□ 1.08
CCDC47-204ENST00000582252 RAP2AP10114 183 aa21.81■■□□□ 1.08
CCDC47-204ENST00000582252 C7P10643 843 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms