RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 KCNE1BA0A087WTH5 132 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 GNG14A0A1W2PPG7 69 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 PRSS38A1L453 326 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 C9JVG2 144 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 GSTA4O15217 222 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 NVLO15381 856 aaKnown RBP8.96□□□□□ -0.98
SS18-220ENST00000582092 TNFP01375 233 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 CFIP05156 583 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 CEACAM5P06731 702 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 ANPEPP15144 967 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 NPPBP16860 134 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 DDX5P17844 614 aaKnown RBP8.96□□□□□ -0.98
SS18-220ENST00000582092 CAPN3P20807 821 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 JAK1P23458 1154 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 PRPH2P23942 346 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 NDUFS1P28331 727 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 GRK3P35626 688 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 NUDT1P36639 197 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 VHLP40337 213 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 ERFP50548 548 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 CLDN8P56748 225 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 YPEL5P62699 121 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 TAP2Q03519 686 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 DMPKQ09013 629 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 BNIP2Q12982 314 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 PWP1Q13610 501 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 RCAN2Q14206 197 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 TRIM25Q14258 630 aaKnown RBP8.96□□□□□ -0.98
SS18-220ENST00000582092 FGL2Q14314 439 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 NFATC4Q14934 902 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 SF3A2Q15428 464 aaKnown RBP8.96□□□□□ -0.98
SS18-220ENST00000582092 PYCR3Q53H96 274 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 SPIN4Q56A73 249 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 TRIM61Q5EBN2 209 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 SLCO4C1Q6ZQN7 724 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 LRRC74BQ6ZQY2 392 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 ARMCX6Q7L4S7 300 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 C11orf96Q7Z7L8 435 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 DHDDSQ86SQ9 333 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 DHFR2Q86XF0 187 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 C2orf73Q8N5S3 287 aaPredicted RBP8.96□□□□□ -0.98
SS18-220ENST00000582092 BHLHE22Q8NFJ8 381 aaPredicted RBP8.96□□□□□ -0.98
SS18-220ENST00000582092 SPDYE1Q8NFV5 336 aaPredicted RBP8.96□□□□□ -0.98
SS18-220ENST00000582092 CADM4Q8NFZ8 388 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 DNAJB14Q8TBM8 379 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 PROKR1Q8TCW9 393 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 NEIL2Q969S2 332 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 CXorf40BQ96DE9 158 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 ITCHQ96J02 903 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 ANKRD27Q96NW4 1050 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 CAMK1GQ96NX5 476 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 KCTD14Q9BQ13 255 aaPredicted RBP8.96□□□□□ -0.98
SS18-220ENST00000582092 ECSITQ9BQ95 431 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 EDEM2Q9BV94 578 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 SGPP1Q9BX95 441 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 ACPTQ9BZG2 426 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 MUC13Q9H3R2 512 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 EHD1Q9H4M9 534 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 PELI2Q9HAT8 420 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 TMEM9BQ9NQ34 198 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 TM7SF3Q9NS93 570 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 WSB2Q9NYS7 404 aaPredicted RBP8.96□□□□□ -0.98
SS18-220ENST00000582092 USP36Q9P275 1121 aaKnown RBP8.96□□□□□ -0.98
SS18-220ENST00000582092 SUCOQ9UBS9 1254 aaKnown RBP8.96□□□□□ -0.98
SS18-220ENST00000582092 NKX1-2Q9UD57 310 aaPredicted RBP8.96□□□□□ -0.98
SS18-220ENST00000582092 PACSIN3Q9UKS6 424 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 PLAGL1Q9UM63 463 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 ZNF292O60281 2723 aa8.96□□□□□ -0.98
SS18-220ENST00000582092 NUMA1Q14980 2115 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 ARHGAP10A1A4S6 786 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 KRT87PA6NCN2 255 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 PRAMEF26H0Y7S4 382 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 TNFRSF10CO14798 259 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 PRMT3O60678 531 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 DNAJA2O60884 412 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 BCAS2O75934 225 aaPredicted RBP8.95□□□□□ -0.98
SS18-220ENST00000582092 RASGRP1O95267 797 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 CCNDBP1O95273 360 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 ANXA4P09525 319 aaPredicted RBP8.95□□□□□ -0.98
SS18-220ENST00000582092 BCKDHAP12694 445 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 CTSEP14091 401 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 ACPPP15309 386 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 AMD1P17707 334 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 XRCC1P18887 633 aaPredicted RBP8.95□□□□□ -0.98
SS18-220ENST00000582092 EPORP19235 508 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 PRPS1L1P21108 318 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 IL10P22301 178 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 PTX3P26022 381 aaPredicted RBP8.95□□□□□ -0.98
SS18-220ENST00000582092 SERPINB1P30740 379 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 ACSL1P33121 698 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 HPCAL1P37235 193 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 RPL3P39023 403 aaKnown RBP8.95□□□□□ -0.98
SS18-220ENST00000582092 RABIFP47224 123 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 PTDSS1P48651 473 aaKnown RBP8.95□□□□□ -0.98
SS18-220ENST00000582092 CCR5P51681 352 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 CCR8P51685 355 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 CLDN2P57739 230 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 PPP2CBP62714 309 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 PPP2CAP67775 309 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 SRSF11Q05519 484 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms