RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 DDX25Q9UHL0 483 aaKnown RBP4□□□□□ -1.77
NF1-220ENST00000581113 ANAPC2Q9UJX6 822 aa4□□□□□ -1.77
NF1-220ENST00000581113 MTUS1Q9ULD2 1270 aa4□□□□□ -1.77
NF1-220ENST00000581113 RIPK3Q9Y572 518 aa4□□□□□ -1.77
NF1-220ENST00000581113 NME7Q9Y5B8 376 aa4□□□□□ -1.77
NF1-220ENST00000581113 MAP3K19Q56UN5 1328 aa4□□□□□ -1.77
NF1-220ENST00000581113 USP54Q70EL1 1684 aa4□□□□□ -1.77
NF1-220ENST00000581113 RREB1Q92766 1687 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 FEZF1A0PJY2 475 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 EDIL3O43854 480 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 STAM2O75886 525 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 WDPCPO95876 746 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 NGFP01138 241 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 PLA2G4BP0C869 781 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 PCP11498 1178 aaKnown RBP3.99□□□□□ -1.77
NF1-220ENST00000581113 TLX1P31314 330 aaPredicted RBP3.99□□□□□ -1.77
NF1-220ENST00000581113 CAPZA2P47755 286 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 NR0B1P51843 470 aaKnown RBP3.99□□□□□ -1.77
NF1-220ENST00000581113 ATP12AP54707 1039 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 KCNJ10P78508 379 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 KLHL30Q0D2K2 578 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 TAF13Q15543 124 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 ANKDD1AQ495B1 522 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 GTDC1Q4AE62 458 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 ELFN2Q5R3F8 820 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 ARHGEF16Q5VV41 709 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 ARHGAP17Q68EM7 881 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 NAA16Q6N069 864 aaPredicted RBP3.99□□□□□ -1.77
NF1-220ENST00000581113 ABRAXAS1Q6UWZ7 409 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 TMEM139Q8IV31 216 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 TC2NQ8N9U0 490 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 KBTBD8Q8NFY9 601 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 TRIM58Q8NG06 486 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 CCDC107Q8WV48 283 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 IRGQQ8WZA9 623 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 KRT35Q92764 455 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 LGALS12Q96DT0 336 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 SEPHS2Q99611 448 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 NUP85Q9BW27 656 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 SERINC1Q9NRX5 453 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 OLAHQ9NV23 265 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 SLC24A2Q9UI40 661 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 ERRFI1Q9UJM3 462 aaPredicted RBP3.99□□□□□ -1.77
NF1-220ENST00000581113 PADI2Q9Y2J8 665 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 NUP188Q5SRE5 1749 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 RTL1A6NKG5 1358 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 WNK3Q9BYP7 1800 aa3.99□□□□□ -1.77
NF1-220ENST00000581113 LOC101059948A0A1B0GTJ6 334 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 TMEM221A6NGB7 291 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 CCDC69A6NI79 296 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 UBE2CO00762 179 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 TBCAO75347 108 aaKnown RBP3.98□□□□□ -1.77
NF1-220ENST00000581113 PRKRAO75569 313 aaKnown RBP3.98□□□□□ -1.77
NF1-220ENST00000581113 PSMD10O75832 226 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 CLPTM1O96005 669 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 LINGO3P0C6S8 592 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 FRMD6-AS1P0C7T7 363 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 KRT13P13646 458 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 P4HA1P13674 534 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 PTPN3P26045 913 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 ATP5DP30049 168 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 CSE1LP55060 971 aaKnown RBP3.98□□□□□ -1.77
NF1-220ENST00000581113 IRX3P78415 501 aaPredicted RBP3.98□□□□□ -1.77
NF1-220ENST00000581113 NFE2L1Q14494 772 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 RRS1Q15050 365 aaKnown RBP3.98□□□□□ -1.77
NF1-220ENST00000581113 SLC15A2Q16348 729 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 MAJINQ3KP22 176 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 PHLDA2Q53GA4 152 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 C9orf152Q5JTZ5 239 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 ADAM5Q6NVV9 412 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 DCLRE1AQ6PJP8 1040 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 KRT74Q7RTS7 529 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 ZER1Q7Z7L7 766 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 CDK20Q8IZL9 346 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 SPC24Q8NBT2 197 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 NPEPL1Q8NDH3 523 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 SSMEM1Q8WWF3 244 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 LRR1Q96L50 414 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 LITAFQ99732 161 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 LAT2Q9GZY6 243 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 LIN28AQ9H9Z2 209 aaKnown RBP3.98□□□□□ -1.77
NF1-220ENST00000581113 HPF1Q9NWY4 346 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 CACNG4Q9UBN1 327 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 ZDHHC2Q9UIJ5 367 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 RGPD3A6NKT7 1758 aaPredicted RBP3.98□□□□□ -1.77
NF1-220ENST00000581113 RGPD4Q7Z3J3 1758 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 RGPD5Q99666 1765 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 IGHV4-61A0A0C4DH41 118 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 A0A1W2PN81 502 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 TCRBV21S2A2A0A5A6 115 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 PI4K2BG5E9Z4 385 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 ATP6V0E1O15342 81 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 RNASEH1O60930 286 aaKnown RBP3.98□□□□□ -1.77
NF1-220ENST00000581113 TRMUO75648 421 aaKnown RBP3.98□□□□□ -1.77
NF1-220ENST00000581113 SLU7O95391 586 aaKnown RBP3.98□□□□□ -1.77
NF1-220ENST00000581113 IGHV4-59P01825 116 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 DANCRP0C864 163 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 GNB3P16520 340 aa3.98□□□□□ -1.77
NF1-220ENST00000581113 EFNA1P20827 205 aaPredicted RBP3.98□□□□□ -1.77
NF1-220ENST00000581113 CA4P22748 312 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms