RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 PPP1CAP62136 330 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 CSNK1G2P78368 415 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 ZNF33BQ06732 778 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 DOC2AQ14183 400 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 RBBP5Q15291 538 aaKnown RBP13.71□□□□□ -0.21
SKA2-205ENST00000580541 ISXQ2M1V0 245 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 GGTA1PQ4G0N0 100 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 MANEAQ5SRI9 462 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 CATSPEREQ5SY80 951 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 HES3Q5TGS1 186 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 GRHL2Q6ISB3 625 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 MED27Q6P2C8 311 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 TMIGD1Q6UXZ0 262 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 TRIM73Q86UV7 250 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 PAQR7Q86WK9 346 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 FAM129CQ86XR2 697 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 D2HGDHQ8N465 521 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 TRPV3Q8NET8 790 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 ADAMTS14Q8WXS8 1223 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 ZNF75CPQ92670 426 aaPredicted RBP13.71□□□□□ -0.21
SKA2-205ENST00000580541 MAGEB18Q96M61 343 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 NSUN5Q96P11 429 aaKnown RBP13.71□□□□□ -0.21
SKA2-205ENST00000580541 ZFYVE21Q9BQ24 234 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 SARGQ9BW04 601 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 ZBTB26Q9HCK0 441 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 DLL3Q9NYJ7 618 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 TMEM9Q9P0T7 183 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 TRPS1Q9UHF7 1281 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 PLCL2Q9UPR0 1127 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 ASB1Q9Y576 335 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 H0YIV9 168 aa13.7□□□□□ -0.22
SKA2-205ENST00000580541 OR1F1O43749 312 aa13.7□□□□□ -0.22
SKA2-205ENST00000580541 CSO75390 466 aaKnown RBP13.7□□□□□ -0.22
SKA2-205ENST00000580541 FGF4P08620 206 aa13.7□□□□□ -0.22
SKA2-205ENST00000580541 PVRP15151 417 aa13.7□□□□□ -0.22
SKA2-205ENST00000580541 HMOX2P30519 316 aa13.7□□□□□ -0.22
SKA2-205ENST00000580541 LSSP48449 732 aa13.7□□□□□ -0.22
SKA2-205ENST00000580541 IFT88Q13099 833 aa13.7□□□□□ -0.22
SKA2-205ENST00000580541 E2F2Q14209 437 aa13.7□□□□□ -0.22
SKA2-205ENST00000580541 ARL13AQ5H913 290 aaPredicted RBP13.7□□□□□ -0.22
SKA2-205ENST00000580541 TCTE1Q5JU00 501 aa13.7□□□□□ -0.22
SKA2-205ENST00000580541 FCRL6Q6DN72 434 aa13.7□□□□□ -0.22
SKA2-205ENST00000580541 MCATQ8IVS2 390 aaKnown RBP13.7□□□□□ -0.22
SKA2-205ENST00000580541 GPR135Q8IZ08 494 aa13.7□□□□□ -0.22
SKA2-205ENST00000580541 CLYBLQ8N0X4 340 aa13.7□□□□□ -0.22
SKA2-205ENST00000580541 DCBLD1Q8N8Z6 715 aa13.7□□□□□ -0.22
SKA2-205ENST00000580541 OR4F6Q8NGB9 312 aa13.7□□□□□ -0.22
SKA2-205ENST00000580541 OR6Y1Q8NGX8 325 aa13.7□□□□□ -0.22
SKA2-205ENST00000580541 METTL6Q8TCB7 284 aa13.7□□□□□ -0.22
SKA2-205ENST00000580541 CKAP2Q8WWK9 683 aa13.7□□□□□ -0.22
SKA2-205ENST00000580541 CCT6BQ92526 530 aa13.7□□□□□ -0.22
SKA2-205ENST00000580541 LIN37Q96GY3 246 aaPredicted RBP13.7□□□□□ -0.22
SKA2-205ENST00000580541 CCT7Q99832 543 aa13.7□□□□□ -0.22
SKA2-205ENST00000580541 SLC29A3Q9BZD2 475 aa13.7□□□□□ -0.22
SKA2-205ENST00000580541 SLC6A20Q9NP91 592 aa13.7□□□□□ -0.22
SKA2-205ENST00000580541 CUEDC1Q9NWM3 386 aaPredicted RBP13.7□□□□□ -0.22
SKA2-205ENST00000580541 NMRK1Q9NWW6 199 aa13.7□□□□□ -0.22
SKA2-205ENST00000580541 GEMIN8Q9NWZ8 242 aaKnown RBP13.7□□□□□ -0.22
SKA2-205ENST00000580541 TSC22D4Q9Y3Q8 395 aa13.7□□□□□ -0.22
SKA2-205ENST00000580541 CEP250Q9BV73 2442 aa13.7□□□□□ -0.22
SKA2-205ENST00000580541 SNRNP200O75643 2136 aaKnown RBP13.69□□□□□ -0.22
SKA2-205ENST00000580541 IGKV1-8A0A0C4DH67 115 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 DCDC2BA2VCK2 349 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 URADA6NGE7 173 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 SLCO1B7G3V0H7 640 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 UROSP10746 265 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 EPORP19235 508 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 VARSP26640 1264 aaKnown RBP13.69□□□□□ -0.22
SKA2-205ENST00000580541 HK2P52789 917 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 SH3BP2P78314 561 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 REEP5Q00765 189 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 SLBPQ14493 270 aaKnown RBP eCLIP13.69□□□□□ -0.22
SKA2-205ENST00000580541 IL11RAQ14626 422 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 CPSF6Q16630 551 aaKnown RBP eCLIP13.69□□□□□ -0.22
SKA2-205ENST00000580541 FBXO42Q6P3S6 717 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 ZCCHC23Q6ZST2 131 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 TMPRSS9Q7Z410 1059 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 MTERF4Q7Z6M4 381 aaKnown RBP13.69□□□□□ -0.22
SKA2-205ENST00000580541 CUZD1Q86UP6 607 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 FAM20CQ8IXL6 584 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 DNAJC22Q8N4W6 341 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 MFSD9Q8NBP5 474 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 CAMKVQ8NCB2 501 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 OR52B6Q8NGF0 335 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 AGAP11Q8TF27 550 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 FAR2Q96K12 515 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 CENPKQ9BS16 269 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 KLHL25Q9H0H3 589 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 ELOVL6Q9H5J4 265 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 IRAK4Q9NWZ3 460 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 PSD3Q9NYI0 1048 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 ZFP69BQ9UJL9 534 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 KLHL20Q9Y2M5 609 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 RNF11Q9Y3C5 154 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 RAP2CQ9Y3L5 183 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 AP1M2Q9Y6Q5 423 aa13.69□□□□□ -0.22
SKA2-205ENST00000580541 CCDC187A0A096LP49 1063 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 A0A0J9YVX5 310 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 B4E171 279 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 HAT1O14929 419 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms