RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 NANOS2P60321 138 aaKnown RBP2.99□□□□□ -1.93
KPNB1-208ENST00000580019 SSTP61278 116 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 HNRNPKP61978 463 aaKnown RBP eCLIP2.99□□□□□ -1.93
KPNB1-208ENST00000580019 SNRPEP62304 92 aaKnown RBP2.99□□□□□ -1.93
KPNB1-208ENST00000580019 EGR4Q05215 589 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 LARS2Q15031 903 aaKnown RBP2.99□□□□□ -1.93
KPNB1-208ENST00000580019 RCN1Q15293 331 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 CARTPTQ16568 116 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 C2orf68Q2NKX9 166 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 KIF19Q2TAC6 998 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 FAM153CQ494X1 144 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 TCTE1Q5JU00 501 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 C6orf10Q5SRN2 563 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 GCNT6Q5T4J0 391 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 ZDHHC20Q5W0Z9 365 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 GGNBP1Q5YKI7 109 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 SULT1C3Q6IMI6 304 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 VWA1Q6PCB0 445 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 LRIG3Q6UXM1 1119 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 DCDC5Q6ZRR9 648 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 CYB5R4Q7L1T6 521 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 NANOGNBQ7Z5D8 188 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 IRF2BP2Q7Z5L9 587 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 SERPINA11Q86U17 422 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 CUZD1Q86UP6 607 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 LUZP1Q86V48 1076 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 CCDC25Q86WR0 208 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 DENND6AQ8IWF6 608 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 AQP12AQ8IXF9 295 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 CENPLQ8N0S6 344 aaPredicted RBP2.99□□□□□ -1.93
KPNB1-208ENST00000580019 PARP16Q8N5Y8 322 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 RNF148Q8N7C7 305 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 NIPA2Q8N8Q9 360 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 L3MBTL4Q8NA19 623 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 KIAA0895Q8NCT3 520 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 GANCQ8TET4 914 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 METTL21AQ8WXB1 218 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 PIGKQ92643 395 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 FBXO32Q969P5 355 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 ESAMQ96AP7 390 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 STAMBPL1Q96FJ0 436 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 P2RY11Q96G91 374 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 DHTKD1Q96HY7 919 aaPredicted RBP2.99□□□□□ -1.93
KPNB1-208ENST00000580019 EPSTI1Q96J88 318 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 PIWIL1Q96J94 861 aaKnown RBP2.99□□□□□ -1.93
KPNB1-208ENST00000580019 PBKQ96KB5 322 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 OR6C1Q96RD1 312 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 RAD9AQ99638 391 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 C17orf62Q9BQA9 187 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 THAP7Q9BT49 309 aaPredicted RBP2.99□□□□□ -1.93
KPNB1-208ENST00000580019 IDI2Q9BXS1 227 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 CAPS2Q9BXY5 557 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 NMNAT2Q9BZQ4 307 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 PKIBQ9C010 78 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 VCX2Q9H322 139 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 CUEDC2Q9H467 287 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 TMEM231Q9H6L2 316 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 CATSPERBQ9H7T0 1116 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 COG4Q9H9E3 785 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 VAT1LQ9HCJ6 419 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 KCNMB3Q9NPA1 279 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 HINT3Q9NQE9 182 aaKnown RBP2.99□□□□□ -1.93
KPNB1-208ENST00000580019 FAM114A2Q9NRY5 505 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 ACSS1Q9NUB1 689 aaPredicted RBP2.99□□□□□ -1.93
KPNB1-208ENST00000580019 ANKRD10Q9NXR5 420 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 CNOT2Q9NZN8 540 aaKnown RBP2.99□□□□□ -1.93
KPNB1-208ENST00000580019 KLHL8Q9P2G9 620 aaPredicted RBP2.99□□□□□ -1.93
KPNB1-208ENST00000580019 STK39Q9UEW8 545 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 TEKT2Q9UIF3 430 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 GRID1Q9ULK0 1009 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 ADAMTS5Q9UNA0 930 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 MGAT4BQ9UQ53 548 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 DLGAP4Q9Y2H0 992 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 ZNF510Q9Y2H8 683 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 NFE2L3Q9Y4A8 694 aa2.99□□□□□ -1.93
KPNB1-208ENST00000580019 PDE4DIPQ5VU43 2346 aa2.98□□□□□ -1.93
KPNB1-208ENST00000580019 CHD2O14647 1828 aaKnown RBP2.98□□□□□ -1.93
KPNB1-208ENST00000580019 PRXQ9BXM0 1461 aa2.98□□□□□ -1.93
KPNB1-208ENST00000580019 COL22A1Q8NFW1 1626 aaPredicted RBP2.98□□□□□ -1.93
KPNB1-208ENST00000580019 LINC00854A0A1B0GVQ3 168 aa2.98□□□□□ -1.93
KPNB1-208ENST00000580019 CXorf65A6NEN9 183 aa2.98□□□□□ -1.93
KPNB1-208ENST00000580019 NCF1BA6NI72 391 aaPredicted RBP2.98□□□□□ -1.93
KPNB1-208ENST00000580019 ZSCAN5BA6NJL1 495 aa2.98□□□□□ -1.93
KPNB1-208ENST00000580019 EIF4E1BA6NMX2 242 aaKnown RBP2.98□□□□□ -1.93
KPNB1-208ENST00000580019 NCF1CA8MVU1 366 aaPredicted RBP2.98□□□□□ -1.93
KPNB1-208ENST00000580019 HEPACAM2A8MVW5 462 aa2.98□□□□□ -1.93
KPNB1-208ENST00000580019 CASC3O15234 703 aaKnown RBP2.98□□□□□ -1.93
KPNB1-208ENST00000580019 CHADO15335 359 aa2.98□□□□□ -1.93
KPNB1-208ENST00000580019 SLC16A5O15375 505 aa2.98□□□□□ -1.93
KPNB1-208ENST00000580019 MPPED1O15442 326 aa2.98□□□□□ -1.93
KPNB1-208ENST00000580019 XRCC3O43542 346 aa2.98□□□□□ -1.93
KPNB1-208ENST00000580019 TLX2O43763 284 aaPredicted RBP2.98□□□□□ -1.93
KPNB1-208ENST00000580019 SPOPO43791 374 aa2.98□□□□□ -1.93
KPNB1-208ENST00000580019 VPS26AO75436 327 aa2.98□□□□□ -1.93
KPNB1-208ENST00000580019 SURF6O75683 361 aaKnown RBP2.98□□□□□ -1.93
KPNB1-208ENST00000580019 SLITRK3O94933 977 aa2.98□□□□□ -1.93
KPNB1-208ENST00000580019 VNN2O95498 520 aa2.98□□□□□ -1.93
KPNB1-208ENST00000580019 ACSL3O95573 720 aa2.98□□□□□ -1.93
KPNB1-208ENST00000580019 GAS8O95995 478 aa2.98□□□□□ -1.93
KPNB1-208ENST00000580019 ANKRD34CP0C6C1 535 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms