RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 ATP6V0D1P61421 351 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 SSPNQ14714 243 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 CPZQ66K79 652 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 SBSNQ6UWP8 590 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 SHISA6Q6ZSJ9 500 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 OVCH1Q7RTY7 1134 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 PRSS58Q8IYP2 241 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 OR56A3Q8NH54 315 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 THAP11Q96EK4 314 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 MMABQ96EY8 250 aaPredicted RBP14.55□□□□□ -0.08
SMG6-220ENST00000576218 ABHD17AQ96GS6 310 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 VPS50Q96JG6 964 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 TSNARE1Q96NA8 513 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 OR2A5Q96R48 311 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 DERL2Q9GZP9 239 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 DRC3Q9H069 523 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 SOX17Q9H6I2 414 aaPredicted RBP14.55□□□□□ -0.08
SMG6-220ENST00000576218 NINJ2Q9NZG7 142 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 CD274Q9NZQ7 290 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 ZNF282Q9UDV7 671 aaPredicted RBP14.55□□□□□ -0.08
SMG6-220ENST00000576218 IKZF3Q9UKT9 509 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 RNF112Q9ULX5 631 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 FEZF1A0PJY2 475 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 B8ZZF3 427 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 WDR47O94967 919 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 ALBP02768 609 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 RHOXF2BP0C7M4 288 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 SLC35G6P0C7Q6 338 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 CRABP2P29373 138 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 CSNK1G2P78368 415 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 CDKL1Q00532 357 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 MEF2AQ02078 507 aaPredicted RBP14.54□□□□□ -0.08
SMG6-220ENST00000576218 RELAQ04206 551 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 RBBP7Q16576 425 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 PPP1R3AQ16821 1122 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 PRTGQ2VWP7 1150 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 GARNL3Q5VVW2 1013 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 MRPL14Q6P1L8 145 aaKnown RBP14.54□□□□□ -0.08
SMG6-220ENST00000576218 MED25Q71SY5 747 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 TAOK1Q7L7X3 1001 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 MRGPREQ86SM8 312 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 TMPRSS11BQ86T26 416 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 THOC6Q86W42 341 aaKnown RBP14.54□□□□□ -0.08
SMG6-220ENST00000576218 PTRH1Q86Y79 214 aaKnown RBP14.54□□□□□ -0.08
SMG6-220ENST00000576218 GPSM1Q86YR5 675 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 IFT20Q8IY31 132 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 TMEM102Q8N9M5 508 aaPredicted RBP14.54□□□□□ -0.08
SMG6-220ENST00000576218 CLEC1AQ8NC01 280 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 CAMKVQ8NCB2 501 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 ZCCHC10Q8TBK6 192 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 SLC5A11Q8WWX8 675 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 MIEF2Q96C03 454 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 C10orf90Q96M02 699 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 FER1L6-AS2Q96M78 137 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 RHOXF2Q9BQY4 288 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 SLC25A23Q9BV35 468 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 WDR54Q9H977 334 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 CNOT10Q9H9A5 744 aaKnown RBP14.54□□□□□ -0.08
SMG6-220ENST00000576218 TRPC4Q9UBN4 977 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 CTSFQ9UBX1 484 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 SH2B3Q9UQQ2 575 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 KCNE2Q9Y6J6 123 aa14.54□□□□□ -0.08
SMG6-220ENST00000576218 ANKRD12Q6UB98 2062 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 A0A0A6YYC8 382 aaPredicted RBP14.53□□□□□ -0.08
SMG6-220ENST00000576218 A6NL46 340 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 I3L1I5 382 aaPredicted RBP14.53□□□□□ -0.08
SMG6-220ENST00000576218 P2RX6O15547 441 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 OR1F1O43749 312 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 SLC28A2O43868 658 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 KLF7O75840 302 aaPredicted RBP14.53□□□□□ -0.08
SMG6-220ENST00000576218 INHBAP08476 426 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 NPPBP16860 134 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 GCGRP47871 477 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 EMP3P54852 163 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 FOXL2P58012 376 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 BMPR2Q13873 1038 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 NKG7Q16617 165 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 MFSD4BQ5TF39 518 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 MROH9Q5TGP6 573 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 CMC1Q7Z7K0 106 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 ASPGQ86U10 573 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 APLFQ8IW19 511 aaPredicted RBP14.53□□□□□ -0.08
SMG6-220ENST00000576218 TCAIMQ8N3R3 496 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 DTWD1Q8N5C7 304 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 ADAMTS17Q8TE56 1095 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 SLC13A3Q8WWT9 602 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 MVB12AQ96EY5 273 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 MCMBPQ9BTE3 642 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 CRB3Q9BUF7 120 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 TRIM55Q9BYV6 548 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 CDC42EP4Q9H3Q1 356 aaKnown RBP14.53□□□□□ -0.08
SMG6-220ENST00000576218 SLC22A14Q9Y267 594 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 TP53TG5Q9Y2B4 290 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 SEC16AO15027 2179 aa14.53□□□□□ -0.08
SMG6-220ENST00000576218 KALRNO60229 2985 aa14.52□□□□□ -0.08
SMG6-220ENST00000576218 SPTA1P02549 2419 aa14.52□□□□□ -0.08
SMG6-220ENST00000576218 SUPT3HB4E1H0 165 aa14.52□□□□□ -0.09
SMG6-220ENST00000576218 NDUFS4O43181 175 aa14.52□□□□□ -0.09
SMG6-220ENST00000576218 SUPT3HO75486 399 aa14.52□□□□□ -0.09
SMG6-220ENST00000576218 LTA4HP09960 611 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms