RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 KCNAB2Q13303 367 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 ATP1A4Q13733 1029 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 GRM7Q14831 915 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 DEFB109BQ30KR1 87 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 ZC3H12BQ5HYM0 836 aaKnown RBP8.26□□□□□ -1.09
SMG6-216ENST00000575176 TCTE1Q5JU00 501 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 CATSPEREQ5SY80 951 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 YOD1Q5VVQ6 348 aaPredicted RBP8.26□□□□□ -1.09
SMG6-216ENST00000575176 ADNP2Q6IQ32 1131 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 TMEM214Q6NUQ4 689 aaKnown RBP8.26□□□□□ -1.09
SMG6-216ENST00000575176 TTC23LQ6PF05 361 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 TTLL10Q6ZVT0 673 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 VN1R5Q7Z5H4 357 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 ADAMTSL2Q86TH1 951 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 ISCA2Q86U28 154 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 PALM2Q8IXS6 379 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 GPR135Q8IZ08 494 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 NKAPQ8N5F7 415 aaKnown RBP8.26□□□□□ -1.09
SMG6-216ENST00000575176 METTL27Q8N6F8 245 aaPredicted RBP8.26□□□□□ -1.09
SMG6-216ENST00000575176 PPM1NQ8N819 430 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 KIF18AQ8NI77 898 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 GABPB2Q8TAK5 448 aaPredicted RBP8.26□□□□□ -1.09
SMG6-216ENST00000575176 MCOLN3Q8TDD5 553 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 UBTD2Q8WUN7 234 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 DCAKDQ8WVC6 231 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 SLC44A1Q8WWI5 657 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 MOCOSQ96EN8 888 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 PRAP1Q96NZ9 151 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 CATSPER2Q96P56 530 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 MACROD1Q9BQ69 325 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 ADNPQ9H2P0 1102 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 WDR54Q9H977 334 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 GPAMQ9HCL2 828 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 SNX15Q9NRS6 342 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 ARL15Q9NXU5 204 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 UTP6Q9NYH9 597 aaKnown RBP8.26□□□□□ -1.09
SMG6-216ENST00000575176 TUBD1Q9UJT1 453 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 FARSAQ9Y285 508 aaKnown RBP8.26□□□□□ -1.09
SMG6-216ENST00000575176 HS3ST3B1Q9Y662 390 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 FEZF1A0PJY2 475 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 HYKKA2RU49 373 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 CDC14CA4D256 554 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 ZNF839A8K0R7 811 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 FFAR3O14843 346 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 GPR42O15529 346 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 KLK8O60259 260 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 KATNA1O75449 491 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 CCNDBP1O95273 360 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 ACSL3O95573 720 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 GUCA1CO95843 209 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 ABHD2P08910 425 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 CCNYL3P0C7X3 344 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 CCDC166P0CW27 439 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 SAT1P21673 171 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 CCND1P24385 295 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 SLC26A3P40879 764 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 GDF5P43026 501 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 SCTRP47872 440 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 DCDP81605 110 aaKnown RBP8.25□□□□□ -1.09
SMG6-216ENST00000575176 DSG2Q14126 1118 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 USP10Q14694 798 aaKnown RBP8.25□□□□□ -1.09
SMG6-216ENST00000575176 NAA25Q14CX7 972 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 FBXO48Q5FWF7 155 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 GRTP1Q5TC63 336 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 C16orf46Q6P387 395 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 OVCH1Q7RTY7 1134 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 ZC3H7AQ8IWR0 971 aaKnown RBP8.25□□□□□ -1.09
SMG6-216ENST00000575176 PLD6Q8N2A8 252 aaKnown RBP8.25□□□□□ -1.09
SMG6-216ENST00000575176 TMEM151AQ8N4L1 468 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 RAB42Q8N4Z0 105 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 CSNK1A1LQ8N752 337 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 KCT2Q8NC54 265 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 MNS1Q8NEH6 495 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 CREB3L4Q8TEY5 395 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 KIAA1191Q96A73 305 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 WDR34Q96EX3 536 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 TSNARE1Q96NA8 513 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 PAFAH2Q99487 392 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 ANKZF1Q9H8Y5 726 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 TMEM184CQ9NVA4 438 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 PTBP2Q9UKA9 531 aaKnown RBP8.25□□□□□ -1.09
SMG6-216ENST00000575176 NFU1Q9UMS0 254 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 SNX7Q9UNH6 387 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 POLHQ9Y253 713 aa8.25□□□□□ -1.09
SMG6-216ENST00000575176 KERAO60938 352 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 DNAJB6O75190 326 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 B3GALT4O96024 378 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 ALBP02768 609 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 C2P06681 752 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 KLK3P07288 261 aaPredicted RBP8.24□□□□□ -1.09
SMG6-216ENST00000575176 SMIM10L1P0DMW3 83 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 STMN1P16949 149 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 TNFRSF8P28908 595 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 SPRP35270 261 aaPredicted RBP8.24□□□□□ -1.09
SMG6-216ENST00000575176 ARSFP54793 590 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 RPS15AP62244 130 aaKnown RBP8.24□□□□□ -1.09
SMG6-216ENST00000575176 MC1RQ01726 317 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 PCDH1Q08174 1060 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 Q0VFX4 171 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 ILF2Q12905 390 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms