RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 SMPDL3AQ92484 453 aa9.24□□□□□ -0.93
NPLOC4-216ENST00000574344 CHMP6Q96FZ7 201 aa9.24□□□□□ -0.93
NPLOC4-216ENST00000574344 CABS1Q96KC9 395 aa9.24□□□□□ -0.93
NPLOC4-216ENST00000574344 PWWP2AQ96N64 755 aa9.24□□□□□ -0.93
NPLOC4-216ENST00000574344 CYTH2Q99418 400 aa9.24□□□□□ -0.93
NPLOC4-216ENST00000574344 ZFYVE21Q9BQ24 234 aa9.24□□□□□ -0.93
NPLOC4-216ENST00000574344 FAM167BQ9BTA0 163 aa9.24□□□□□ -0.93
NPLOC4-216ENST00000574344 DPH7Q9BTV6 452 aa9.24□□□□□ -0.93
NPLOC4-216ENST00000574344 ACSS3Q9H6R3 686 aa9.24□□□□□ -0.93
NPLOC4-216ENST00000574344 MLXIPLQ9NP71 852 aa9.24□□□□□ -0.93
NPLOC4-216ENST00000574344 KCNK9Q9NPC2 374 aa9.24□□□□□ -0.93
NPLOC4-216ENST00000574344 TAC3Q9UHF0 121 aa9.24□□□□□ -0.93
NPLOC4-216ENST00000574344 CHMP2BQ9UQN3 213 aa9.24□□□□□ -0.93
NPLOC4-216ENST00000574344 RELNP78509 3460 aa9.24□□□□□ -0.93
NPLOC4-216ENST00000574344 SCN2AQ99250 2005 aa9.24□□□□□ -0.93
NPLOC4-216ENST00000574344 ZCWPW2A0A1B0GU75 182 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 A0A1W2PPV9 198 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 TMEM120BA0PK00 339 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 HYKKA2RU49 373 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 MYO1CO00159 1063 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 MASP2O00187 686 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 PRICKLE3O43900 615 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 SRPX2O60687 465 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 ALOX12BO75342 701 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 PSIP1O75475 530 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 UMODP07911 640 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 INHBAP08476 426 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 ITGAXP20702 1163 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 FBLP22087 321 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 ITGA3P26006 1051 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 MSH2P43246 934 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 UQCRFS1P47985 274 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 CLCN7P51798 805 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 PNLIPRP1P54315 467 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 MPP1Q00013 466 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 OCA2Q04671 838 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 MYBPC3Q14896 1274 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 NKG7Q16617 165 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 MUM1Q2TAK8 710 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 HSP90AA5PQ58FG0 334 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 TNFAIP8L3Q5GJ75 292 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 SLC6A19Q695T7 634 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 JMJD6Q6NYC1 403 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 RNF44Q7L0R7 432 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 OVCH1Q7RTY7 1134 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 PPP1R32Q7Z5V6 425 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 LMNTD2Q8IXW0 634 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 PRSS58Q8IYP2 241 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 DTWD1Q8N5C7 304 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 PPFIBP2Q8ND30 876 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 ZNF473Q8WTR7 871 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 TM9SF4Q92544 642 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 KCNJ9Q92806 393 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 RERGQ96A58 199 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 COL26A1Q96A83 441 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 ALKBH8Q96BT7 664 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 CFAP36Q96G28 342 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 VPS50Q96JG6 964 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 PKP4Q99569 1192 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 GPR21Q99679 349 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 SMAD5Q99717 465 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 SLC30A3Q99726 388 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 NAT9Q9BTE0 207 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 YIPF2Q9BWQ6 316 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 SLC29A3Q9BZD2 475 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 ILKAPQ9H0C8 392 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 CCDC134Q9H6E4 229 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 WDR54Q9H977 334 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 LRRC4CQ9HCJ2 640 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 ZNF304Q9HCX3 659 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 SSU72Q9NP77 194 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 SLC6A20Q9NP91 592 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 ATP13A2Q9NQ11 1180 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 SLC22A11Q9NSA0 550 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 IARS2Q9NSE4 1012 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 UTP6Q9NYH9 597 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 CTSFQ9UBX1 484 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 TBK1Q9UHD2 729 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 TRMT6Q9UJA5 497 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 FBXL4Q9UKA2 621 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 NXT1Q9UKK6 140 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 COMMD10Q9Y6G5 202 aa9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 UTP20O75691 2785 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-216ENST00000574344 LRRK2Q5S007 2527 aa9.22□□□□□ -0.93
NPLOC4-216ENST00000574344 LOC105369274A0A096LPK9 316 aa9.22□□□□□ -0.93
NPLOC4-216ENST00000574344 LOC102723532A0A0G2JNH3 316 aa9.22□□□□□ -0.93
NPLOC4-216ENST00000574344 OR2A25A4D2G3 310 aa9.22□□□□□ -0.93
NPLOC4-216ENST00000574344 PABPN1LA6NDY0 278 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-216ENST00000574344 ZBTB14O43829 449 aa9.22□□□□□ -0.93
NPLOC4-216ENST00000574344 IPO13O94829 963 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-216ENST00000574344 SORBS2O94875 1100 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-216ENST00000574344 ZWINTO95229 277 aa9.22□□□□□ -0.93
NPLOC4-216ENST00000574344 SLC16A8O95907 504 aa9.22□□□□□ -0.93
NPLOC4-216ENST00000574344 ALBP02768 609 aa9.22□□□□□ -0.93
NPLOC4-216ENST00000574344 VIMP08670 466 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-216ENST00000574344 ANXA5P08758 320 aa9.22□□□□□ -0.93
NPLOC4-216ENST00000574344 MPC1LP0DKB6 136 aa9.22□□□□□ -0.93
NPLOC4-216ENST00000574344 ERGP11308 486 aa9.22□□□□□ -0.93
NPLOC4-216ENST00000574344 ENO3P13929 434 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms