RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 PAQR7Q86WK9 346 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 KLHDC8AQ8IYD2 350 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 SLC38A9Q8NBW4 561 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 LSM14AQ8ND56 463 aaKnown RBP12.96□□□□□ -0.33
RPAIN-213ENST00000573577 MZB1Q8WU39 189 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 CT55Q8WUE5 264 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 SLC5A11Q8WWX8 675 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 STARD8Q92502 1023 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 WBP1Q96G27 269 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 PRAP1Q96NZ9 151 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 SELENOSQ9BQE4 189 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 TMEM109Q9BVC6 243 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 MRPL46Q9H2W6 279 aaKnown RBP12.96□□□□□ -0.33
RPAIN-213ENST00000573577 DNAJC11Q9NVH1 559 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 GPRC5BQ9NZH0 403 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 XPR1Q9UBH6 696 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 DCDC2Q9UHG0 476 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 TNPO3Q9Y5L0 923 aaKnown RBP12.96□□□□□ -0.33
RPAIN-213ENST00000573577 PCM1Q15154 2024 aa12.96□□□□□ -0.34
RPAIN-213ENST00000573577 IGKV1-8A0A0C4DH67 115 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 A0A0J9YVX5 310 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 C21orf140B9A014 251 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 GOLGA8RI6L899 631 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 ZSCAN9O15535 394 aaPredicted RBP12.95□□□□□ -0.34
RPAIN-213ENST00000573577 HCRTR1O43613 425 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 CTSVO60911 334 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 GLRA3O75311 464 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 CDH1P12830 882 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 MTHFD2P13995 350 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 GNAZP19086 355 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 TAC1P20366 129 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 F8A1P23610 371 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 HSPA7P48741 367 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 ALDH18A1P54886 795 aaKnown RBP12.95□□□□□ -0.34
RPAIN-213ENST00000573577 RPS15AP62244 130 aaKnown RBP12.95□□□□□ -0.34
RPAIN-213ENST00000573577 YBX1P67809 324 aaKnown RBP12.95□□□□□ -0.34
RPAIN-213ENST00000573577 CDC16Q13042 620 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 GPS2Q13227 327 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 ZXDCQ2QGD7 858 aaPredicted RBP12.95□□□□□ -0.34
RPAIN-213ENST00000573577 METTL2BQ6P1Q9 378 aaKnown RBP12.95□□□□□ -0.34
RPAIN-213ENST00000573577 TTC29Q8NA56 475 aaPredicted RBP12.95□□□□□ -0.34
RPAIN-213ENST00000573577 ABHD11Q8NFV4 315 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 UBTD2Q8WUN7 234 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 RERGQ96A58 199 aaPredicted RBP12.95□□□□□ -0.34
RPAIN-213ENST00000573577 CLIP3Q96DZ5 547 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 THAP11Q96EK4 314 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 LRFN5Q96NI6 719 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 OR4K3Q96R72 315 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 TMEM79Q9BSE2 394 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 CD244Q9BZW8 370 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 ACTR5Q9H9F9 607 aaPredicted RBP12.95□□□□□ -0.34
RPAIN-213ENST00000573577 AKIRIN1Q9H9L7 192 aaPredicted RBP12.95□□□□□ -0.34
RPAIN-213ENST00000573577 PELI2Q9HAT8 420 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 ZNF358Q9NW07 568 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 CUEDC1Q9NWM3 386 aaPredicted RBP12.95□□□□□ -0.34
RPAIN-213ENST00000573577 CPSF2Q9P2I0 782 aaKnown RBP12.95□□□□□ -0.34
RPAIN-213ENST00000573577 LGALS13Q9UHV8 139 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 KCND3Q9UK17 655 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 SRPK3Q9UPE1 567 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 PCDHGA6Q9Y5G7 932 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 ATMQ13315 3056 aa12.95□□□□□ -0.34
RPAIN-213ENST00000573577 A0A1W2PPM1 405 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 H3BMH7 237 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 TK2O00142 265 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 MEN1O00255 615 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 TXNDC9O14530 226 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 CLGNO14967 610 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 TAPBPO15533 448 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 CTIFO43310 598 aaKnown RBP12.94□□□□□ -0.34
RPAIN-213ENST00000573577 ZNF749O43361 778 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 KLK8O60259 260 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 CCNT2O60583 730 aaKnown RBP12.94□□□□□ -0.34
RPAIN-213ENST00000573577 KLK3P07288 261 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-213ENST00000573577 TCN2P20062 427 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 CXCR2P25025 360 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 RORAP35398 523 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 GDF5P43026 501 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 ARSFP54793 590 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 MC1RQ01726 317 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 DNASE1L3Q13609 305 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 GRM7Q14831 915 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 SETDB1Q15047 1291 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 PDK4Q16654 411 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 PFKFB4Q16877 469 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 KRT71Q3SY84 523 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 YOD1Q5VVQ6 348 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-213ENST00000573577 FBXO42Q6P3S6 717 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 FAM199XQ6PEV8 388 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-213ENST00000573577 ZNF517Q6ZMY9 492 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-213ENST00000573577 TMPRSS11BQ86T26 416 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 CYP4X1Q8N118 509 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 ZNF655Q8N720 491 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-213ENST00000573577 SNX31Q8N9S9 440 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 NEIL2Q969S2 332 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 AIF1LQ9BQI0 150 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 NDC1Q9BTX1 674 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 NLNQ9BYT8 704 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 ENAMQ9NRM1 1142 aa12.94□□□□□ -0.34
RPAIN-213ENST00000573577 ARGLU1Q9NWB6 273 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-213ENST00000573577 OPTCQ9UBM4 332 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms