RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 MAN1B1Q9UKM7 699 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 INTS6Q9UL03 887 aaKnown RBP3.89□□□□□ -1.79
NUP88-202ENST00000570937 CDH7Q9ULB5 785 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 KCNS2Q9ULS6 477 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 ARHGAP26Q9UNA1 814 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 GTF2A1LQ9UNN4 478 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 VCANP13611 3396 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 MTMR11A4FU01 709 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 LILRA5A6NI73 299 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 LRRIQ3A6PVS8 624 aaPredicted RBP3.88□□□□□ -1.79
NUP88-202ENST00000570937 C2CD4DB7Z1M9 353 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 SEC24AO95486 1093 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 ASS1P00966 412 aaKnown RBP3.88□□□□□ -1.79
NUP88-202ENST00000570937 TPM2P07951 284 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 OR4Q2P0C623 313 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 CSH1P0DML2 217 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 CSH2P0DML3 217 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 HAPLN1P10915 354 aaPredicted RBP3.88□□□□□ -1.79
NUP88-202ENST00000570937 HLA-DOBP13765 273 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 PTMSP20962 102 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 SP100P23497 879 aaPredicted RBP3.88□□□□□ -1.79
NUP88-202ENST00000570937 CDC25CP30307 473 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 BDKRB2P30411 391 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 USP8P40818 1118 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 MAGEA11P43364 429 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 GCLMP48507 274 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 CASP4P49662 377 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 FUT6P51993 359 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 MYL6P60660 151 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 RELQ04864 619 aaPredicted RBP3.88□□□□□ -1.79
NUP88-202ENST00000570937 ACSM2AQ08AH3 577 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 SIGLEC14Q08ET2 396 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 OLIG2Q13516 323 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 TPD52L1Q16890 204 aaPredicted RBP3.88□□□□□ -1.79
NUP88-202ENST00000570937 ACCSLQ4AC99 568 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 ZCWPW2Q504Y3 356 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 INTS11Q5TA45 600 aaKnown RBP3.88□□□□□ -1.79
NUP88-202ENST00000570937 KLHL10Q6JEL2 608 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 FAM171BQ6P995 826 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 GFRALQ6UXV0 394 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 MEX3BQ6ZN04 569 aaKnown RBP3.88□□□□□ -1.79
NUP88-202ENST00000570937 USP43Q70EL4 1123 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 DNAJB7Q7Z6W7 309 aaPredicted RBP3.88□□□□□ -1.79
NUP88-202ENST00000570937 ZNF329Q86UD4 541 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 TMEM219Q86XT9 240 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 CREBRFQ8IUR6 639 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 C1orf87Q8N0U7 546 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 LMNTD1Q8N9Z9 388 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 ATAD1Q8NBU5 361 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 FBXL13Q8NEE6 735 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 OR2AK2Q8NG84 335 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 OR10T2Q8NGX3 314 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 NELFBQ8WX92 580 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 SMARCD2Q92925 531 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 PSMG2Q969U7 264 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 ELSPBP1Q96BH3 223 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 FAM81BQ96LP2 452 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 NODALQ96S42 347 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 SYT15Q9BQS2 421 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 ELOVL4Q9GZR5 314 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 NAT10Q9H0A0 1025 aaKnown RBP3.88□□□□□ -1.79
NUP88-202ENST00000570937 CLSTN2Q9H4D0 955 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 ZFP14Q9HCL3 533 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 PREBQ9HCU5 417 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 LTB4R2Q9NPC1 389 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 TCF7L2Q9NQB0 619 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 RAB20Q9NX57 234 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 TAS2R10Q9NYW0 307 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 RWDD2AQ9UIY3 292 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 GTF3C4Q9UKN8 822 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 TMEM98Q9Y2Y6 226 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 YIPF1Q9Y548 306 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 PSAT1Q9Y617 370 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 C5orf42Q9H799 3197 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 CITO14578 2027 aa3.88□□□□□ -1.79
NUP88-202ENST00000570937 A0A1W2PS18 150 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 MYBPHLA2RUH7 354 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 TMEM221A6NGB7 291 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 ANHXE9PGG2 379 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 M0R296 226 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 P4HA2O15460 535 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 ECI2O75521 394 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 RTN3O95197 1032 aaPredicted RBP3.87□□□□□ -1.79
NUP88-202ENST00000570937 LETM1O95202 739 aaPredicted RBP3.87□□□□□ -1.79
NUP88-202ENST00000570937 HLA-DRAP01903 254 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 BDNFP23560 247 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 ACAT1P24752 427 aaKnown RBP3.87□□□□□ -1.79
NUP88-202ENST00000570937 CYP2F1P24903 491 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 LMO2P25791 158 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 NOP14P78316 857 aaKnown RBP3.87□□□□□ -1.79
NUP88-202ENST00000570937 HTR4Q13639 388 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 COL28A1Q2UY09 1125 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 MDH1BQ5I0G3 518 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 GFI1BQ5VTD9 330 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 FRG2Q64ET8 278 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 CDC73Q6P1J9 531 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 SASS6Q6UVJ0 657 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 DENND5BQ6ZUT9 1274 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 HAPLN4Q86UW8 402 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 KMT5CQ86Y97 462 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms