RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 TSFMP43897 325 aaKnown RBP13.14□□□□□ -0.31
GTF3C1-211ENST00000569653 CDKN2DP55273 166 aa13.14□□□□□ -0.31
GTF3C1-211ENST00000569653 MFAP5Q13361 173 aa13.14□□□□□ -0.31
GTF3C1-211ENST00000569653 THOC5Q13769 683 aaKnown RBP13.14□□□□□ -0.31
GTF3C1-211ENST00000569653 PCOLCEQ15113 449 aa13.14□□□□□ -0.31
GTF3C1-211ENST00000569653 LONRF1Q17RB8 773 aa13.14□□□□□ -0.31
GTF3C1-211ENST00000569653 HSP90AA5PQ58FG0 334 aa13.14□□□□□ -0.31
GTF3C1-211ENST00000569653 MYO7BQ6PIF6 2116 aa13.14□□□□□ -0.31
GTF3C1-211ENST00000569653 BRIX1Q8TDN6 353 aaKnown RBP13.14□□□□□ -0.31
GTF3C1-211ENST00000569653 GRHL3Q8TE85 626 aa13.14□□□□□ -0.31
GTF3C1-211ENST00000569653 TM9SF4Q92544 642 aa13.14□□□□□ -0.31
GTF3C1-211ENST00000569653 CNDP1Q96KN2 507 aa13.14□□□□□ -0.31
GTF3C1-211ENST00000569653 CCDC138Q96M89 665 aa13.14□□□□□ -0.31
GTF3C1-211ENST00000569653 PRAP1Q96NZ9 151 aa13.14□□□□□ -0.31
GTF3C1-211ENST00000569653 IARS2Q9NSE4 1012 aaKnown RBP13.14□□□□□ -0.31
GTF3C1-211ENST00000569653 KLHL42Q9P2K6 505 aa13.14□□□□□ -0.31
GTF3C1-211ENST00000569653 MAD1L1Q9Y6D9 718 aa13.14□□□□□ -0.31
GTF3C1-211ENST00000569653 LOC102723996A0A087X1L8 192 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 IGHV1-45A0A0A0MS14 117 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 OR2W5A6NFC9 320 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 TSPAN12O95859 305 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 ERVK-10P10266 1014 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 EZRP15311 586 aaKnown RBP13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 VARSP26640 1264 aaKnown RBP13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 CARSP49589 748 aaKnown RBP13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 EMP2P54851 167 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 TBPL1P62380 186 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 OCA2Q04671 838 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 SRSF11Q05519 484 aaKnown RBP13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 CRYMQ14894 314 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 ZNF169Q14929 603 aaPredicted RBP13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 PPP1R7Q15435 360 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 PHKG1Q16816 387 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 B3GNTL1Q67FW5 361 aaPredicted RBP13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 ZNF787Q6DD87 383 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 ISLR2Q6UXK2 745 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 UBE2R2Q712K3 238 aaPredicted RBP13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 SIRT6Q8N6T7 355 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 C2CD4AQ8NCU7 369 aaPredicted RBP13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 OR9A4Q8NGU2 314 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 DNAJB14Q8TBM8 379 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 EEF1AKMT1Q8WVE0 214 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 MMABQ96EY8 250 aaPredicted RBP13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 PWWP2AQ96N64 755 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 TAAR6Q96RI8 345 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 TGIF2Q9GZN2 237 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 PLA2G3Q9NZ20 509 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 IKZF3Q9UKT9 509 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 PDE10AQ9Y233 779 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 VPS9D1Q9Y2B5 631 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 SAR1BQ9Y6B6 198 aa13.13□□□□□ -0.31
GTF3C1-211ENST00000569653 FBN2P35556 2912 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 PCNX1Q96RV3 2341 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 ABCA12Q86UK0 2595 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 APCP25054 2843 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 MAGEB16A2A368 324 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 PFDN6O15212 129 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 VPS26AO75436 327 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 F10P00742 488 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 ITGAMP11215 1152 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 ENO3P13929 434 aaPredicted RBP13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 IVDP26440 423 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 HSD17B2P37059 387 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 CSNK1G2P78368 415 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 RELAQ04206 551 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 DHX9Q08211 1270 aaKnown RBP13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 TTLL9Q3SXZ7 439 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 ZNF324BQ6AW86 544 aaPredicted RBP13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 PAQR3Q6TCH7 311 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 TMEM205Q6UW68 189 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 LANCL3Q6ZV70 420 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 NDUFAF7Q7L592 441 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 ADCK2Q7Z695 626 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 PDSS2Q86YH6 399 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 LURAP1LQ8IV03 231 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 ST6GALNAC3Q8NDV1 305 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 MVB12AQ96EY5 273 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 CAPZA3Q96KX2 299 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 RUNDC3BQ96NL0 473 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 SLX1AQ9BQ83 275 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 DRC3Q9H069 523 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 DDX47Q9H0S4 455 aaKnown RBP13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 PTGFRNQ9P2B2 879 aa13.12□□□□□ -0.31
GTF3C1-211ENST00000569653 NSG1A0A0A6YYJ2 146 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 IGHV3-20A0A0C4DH32 117 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 CTAGE15A4D2H0 777 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 LCMT2O60294 686 aaKnown RBP13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 KLHL41O60662 606 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 DNAJB6O75190 326 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 WISP2O76076 250 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 CCNDBP1O95273 360 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 BMP10O95393 424 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 DDAH2O95865 285 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 PGAM1P18669 254 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 BCL6P41182 706 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 ABATP80404 500 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 CDC16Q13042 620 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 NAA25Q14CX7 972 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 GARNL3Q5VVW2 1013 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms