RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 PRM3Q9NNZ6 103 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 WDR70Q9NW82 654 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 DKK4Q9UBT3 224 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 PILRAQ9UKJ1 303 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 AP1M2Q9Y6Q5 423 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 SDK2Q58EX2 2172 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 LOC105369274A0A096LPK9 316 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 LOC102723532A0A0G2JNH3 316 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 TRBC2A0A5B9 178 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 H0YGG7 62 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 STMND1H3BQB6 276 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 E2F3O00716 465 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 ZSCAN9O15535 394 aaPredicted RBP12.49□□□□□ -0.41
CNOT1-217ENST00000569263 ZNF749O43361 778 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 OR1F1O43749 312 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 DLX3O60479 287 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 TIAF1O95411 115 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 RPS17P08708 135 aaKnown RBP12.49□□□□□ -0.41
CNOT1-217ENST00000569263 HBQ1P09105 142 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 ZNF28P17035 718 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 BCL6P41182 706 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 ARF3P61204 181 aaPredicted RBP12.49□□□□□ -0.41
CNOT1-217ENST00000569263 HERVK_113P63132 956 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 CHIT1Q13231 466 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 LAPTM5Q13571 262 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 SLBPQ14493 270 aaKnown RBP eCLIP12.49□□□□□ -0.41
CNOT1-217ENST00000569263 GRM7Q14831 915 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 PAGE2BQ5JRK9 111 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 WASHC2DQ5SRD0 308 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 FBXO42Q6P3S6 717 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 SLCO4C1Q6ZQN7 724 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 GOLGA7Q7Z5G4 137 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 EXOC3L1Q86VI1 746 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 ZFAND4Q86XD8 727 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 MYLK4Q86YV6 388 aaPredicted RBP12.49□□□□□ -0.41
CNOT1-217ENST00000569263 OR4N4Q8N0Y3 316 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 KRT78Q8N1N4 520 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 ZNF655Q8N720 491 aaPredicted RBP12.49□□□□□ -0.41
CNOT1-217ENST00000569263 CSNK1A1LQ8N752 337 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 GOLGA6L1Q8N7Z2 621 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 ARMC2Q8NEN0 867 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 OR4K1Q8NGD4 311 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 FGF11Q92914 225 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 ATP6V1E2Q96A05 226 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 CLIP3Q96DZ5 547 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 THAP11Q96EK4 314 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 PTCD3Q96EY7 689 aaKnown RBP12.49□□□□□ -0.41
CNOT1-217ENST00000569263 FAM111AQ96PZ2 611 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 TMEM237Q96Q45 408 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 OR2A5Q96R48 311 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 EFCAB11Q9BUY7 163 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 ERVK-6Q9BXR3 956 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 SPNS1Q9H2V7 528 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 EHD1Q9H4M9 534 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 IPPKQ9H8X2 491 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 ACTR8Q9H981 624 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 VIPAS39Q9H9C1 493 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 TMBIM4Q9HC24 238 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 STARD5Q9NSY2 213 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 TXLNGQ9NUQ3 528 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 PCTPQ9UKL6 214 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 SRPK3Q9UPE1 567 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 PLLPQ9Y342 182 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 PCDHB3Q9Y5E6 796 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 PCDHGA4Q9Y5G9 962 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 ACTL7BQ9Y614 415 aa12.49□□□□□ -0.41
CNOT1-217ENST00000569263 TMEM8BA6NDV4 472 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 G3V2L1 256 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 TXNDC9O14530 226 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 SUPT7LO94864 414 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 NTRK1P04629 796 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 SERPIND1P05546 499 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 CTSBP07858 339 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 SLC35G6P0C7Q6 338 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 LIPCP11150 499 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 CPA3P15088 417 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 CREB1P16220 341 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 EPORP19235 508 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 CCNG1P51959 295 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 DOC2AQ14183 400 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 RBBP5Q15291 538 aaKnown RBP12.48□□□□□ -0.41
CNOT1-217ENST00000569263 RBBP7Q16576 425 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 HIST2H2ACQ16777 129 aaPredicted RBP12.48□□□□□ -0.41
CNOT1-217ENST00000569263 TNFAIP8L3Q5GJ75 292 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 HIST2H2AA3Q6FI13 130 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 ASPGQ86U10 573 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 MFSD9Q8NBP5 474 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 CAMKVQ8NCB2 501 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 TCP10LQ8TDR4 215 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 SREK1Q8WXA9 508 aaKnown RBP12.48□□□□□ -0.41
CNOT1-217ENST00000569263 ZCCHC14Q8WYQ9 949 aaKnown RBP12.48□□□□□ -0.41
CNOT1-217ENST00000569263 ZNF285Q96NJ3 590 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 ACBD3Q9H3P7 528 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 SSU72Q9NP77 194 aaKnown RBP12.48□□□□□ -0.41
CNOT1-217ENST00000569263 KCNK9Q9NPC2 374 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 SEMA4BQ9NPR2 832 aaPredicted RBP12.48□□□□□ -0.41
CNOT1-217ENST00000569263 GEMIN8Q9NWZ8 242 aaKnown RBP12.48□□□□□ -0.41
CNOT1-217ENST00000569263 COPG2Q9UBF2 871 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 ACSL6Q9UKU0 697 aa12.48□□□□□ -0.41
CNOT1-217ENST00000569263 TMEM184BQ9Y519 407 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms