RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 CST8O60676 142 aa8.16□□□□□ -1.1
SMG1-216ENST00000569122 ATE1O95260 518 aa8.16□□□□□ -1.1
SMG1-216ENST00000569122 CCNDBP1O95273 360 aa8.16□□□□□ -1.1
SMG1-216ENST00000569122 LY6G6DO95868 133 aa8.16□□□□□ -1.1
SMG1-216ENST00000569122 FAM228BP0C875 321 aa8.16□□□□□ -1.1
SMG1-216ENST00000569122 ACVR2AP27037 513 aa8.16□□□□□ -1.1
SMG1-216ENST00000569122 CDKN1CP49918 316 aaPredicted RBP8.16□□□□□ -1.1
SMG1-216ENST00000569122 NUP107P57740 925 aa8.16□□□□□ -1.1
SMG1-216ENST00000569122 NKX6-1P78426 367 aaPredicted RBP8.16□□□□□ -1.1
SMG1-216ENST00000569122 MEF2AQ02078 507 aaPredicted RBP8.16□□□□□ -1.1
SMG1-216ENST00000569122 MESDQ14696 234 aa8.16□□□□□ -1.1
SMG1-216ENST00000569122 DAZAP2Q15038 168 aaPredicted RBP8.16□□□□□ -1.1
SMG1-216ENST00000569122 GXYLT1Q4G148 440 aa8.16□□□□□ -1.1
SMG1-216ENST00000569122 FLYWCH1Q4VC44 716 aa8.16□□□□□ -1.1
SMG1-216ENST00000569122 RNFT1Q5M7Z0 435 aa8.16□□□□□ -1.1
SMG1-216ENST00000569122 E4F1Q66K89 784 aaPredicted RBP8.16□□□□□ -1.1
SMG1-216ENST00000569122 B3GNT6Q6ZMB0 384 aa8.16□□□□□ -1.1
SMG1-216ENST00000569122 PCGF5Q86SE9 256 aa8.16□□□□□ -1.1
SMG1-216ENST00000569122 RNF25Q96BH1 459 aaPredicted RBP8.16□□□□□ -1.1
SMG1-216ENST00000569122 IQCDQ96DY2 449 aa8.16□□□□□ -1.1
SMG1-216ENST00000569122 DNAJC1Q96KC8 554 aaKnown RBP8.16□□□□□ -1.1
SMG1-216ENST00000569122 IL17FQ96PD4 163 aa8.16□□□□□ -1.1
SMG1-216ENST00000569122 QKIQ96PU8 341 aaKnown RBP eCLIP8.16□□□□□ -1.1
SMG1-216ENST00000569122 PLCD4Q9BRC7 762 aa8.16□□□□□ -1.1
SMG1-216ENST00000569122 BDH2Q9BUT1 245 aa8.16□□□□□ -1.1
SMG1-216ENST00000569122 NAT10Q9H0A0 1025 aaKnown RBP8.16□□□□□ -1.1
SMG1-216ENST00000569122 IMPACTQ9P2X3 320 aa8.16□□□□□ -1.1
SMG1-216ENST00000569122 FOXD3Q9UJU5 478 aaPredicted RBP8.16□□□□□ -1.1
SMG1-216ENST00000569122 RUVBL1Q9Y265 456 aaKnown RBP8.16□□□□□ -1.1
SMG1-216ENST00000569122 FLNAP21333 2647 aaKnown RBP8.16□□□□□ -1.1
SMG1-216ENST00000569122 STAB1Q9NY15 2570 aa8.16□□□□□ -1.1
SMG1-216ENST00000569122 COL6A5A8TX70 2615 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 A0A0A6YYC8 382 aaPredicted RBP8.15□□□□□ -1.1
SMG1-216ENST00000569122 IGHV3-20A0A0C4DH32 117 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 ZNF839A8K0R7 811 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 I3L1I5 382 aaPredicted RBP8.15□□□□□ -1.1
SMG1-216ENST00000569122 ACOT7O00154 380 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 SYT5O00445 386 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 FFAR3O14843 346 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 GPR42O15529 346 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 ZNHIT1O43257 154 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 PEX1O43933 1283 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 HS6ST1O60243 411 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 GPC4O75487 556 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 EZRP15311 586 aaKnown RBP8.15□□□□□ -1.1
SMG1-216ENST00000569122 MSNP26038 577 aaKnown RBP8.15□□□□□ -1.1
SMG1-216ENST00000569122 PCSK6P29122 969 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 TRHRP34981 398 aaPredicted RBP8.15□□□□□ -1.1
SMG1-216ENST00000569122 HSD17B2P37059 387 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 HLCSP50747 726 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 DLX5P56178 289 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 MPP1Q00013 466 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 MSLNQ13421 630 aaPredicted RBP8.15□□□□□ -1.1
SMG1-216ENST00000569122 NSDHLQ15738 373 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 CMPK2Q5EBM0 449 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 CATSPEREQ5SY80 951 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 MEI1Q5TIA1 1274 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 PAPD4Q6PIY7 484 aaKnown RBP8.15□□□□□ -1.1
SMG1-216ENST00000569122 CHSY3Q70JA7 882 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 ANKRD37Q7Z713 158 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 PIANPQ8IYJ0 282 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 ZFP62Q8NB50 900 aaPredicted RBP8.15□□□□□ -1.1
SMG1-216ENST00000569122 OR2A1Q8NGT9 310 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 HAUS1Q96CS2 278 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 PANX2Q96RD6 677 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 EBNA1BP2Q99848 306 aaKnown RBP8.15□□□□□ -1.1
SMG1-216ENST00000569122 TBL1YQ9BQ87 522 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 APOL2Q9BQE5 337 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 TTYH2Q9BSA4 534 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 DPH7Q9BTV6 452 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 CARD6Q9BX69 1037 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 MRPS30Q9NP92 439 aaKnown RBP8.15□□□□□ -1.1
SMG1-216ENST00000569122 CRIM1Q9NZV1 1036 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 SPATA7Q9P0W8 599 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 STOX2Q9P2F5 926 aaPredicted RBP8.15□□□□□ -1.1
SMG1-216ENST00000569122 SAE1Q9UBE0 346 aaPredicted RBP8.15□□□□□ -1.1
SMG1-216ENST00000569122 HRH3Q9Y5N1 445 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 PRSS21Q9Y6M0 314 aa8.15□□□□□ -1.1
SMG1-216ENST00000569122 NUP210LQ5VU65 1888 aa8.15□□□□□ -1.11
SMG1-216ENST00000569122 NSD1Q96L73 2696 aaPredicted RBP8.15□□□□□ -1.11
SMG1-216ENST00000569122 CCDC88CQ9P219 2028 aa8.14□□□□□ -1.11
SMG1-216ENST00000569122 A0A0U1RQJ8 604 aa8.14□□□□□ -1.11
SMG1-216ENST00000569122 SMTNL1A8MU46 457 aa8.14□□□□□ -1.11
SMG1-216ENST00000569122 H7C0C1 242 aa8.14□□□□□ -1.11
SMG1-216ENST00000569122 CCL22O00626 93 aa8.14□□□□□ -1.11
SMG1-216ENST00000569122 FOXS1O43638 330 aa8.14□□□□□ -1.11
SMG1-216ENST00000569122 WDR1O75083 606 aa8.14□□□□□ -1.11
SMG1-216ENST00000569122 NSA2O95478 260 aaKnown RBP8.14□□□□□ -1.11
SMG1-216ENST00000569122 CCR7P32248 378 aa8.14□□□□□ -1.11
SMG1-216ENST00000569122 RPA3P35244 121 aaPredicted RBP8.14□□□□□ -1.11
SMG1-216ENST00000569122 CDKN2BP42772 138 aa8.14□□□□□ -1.11
SMG1-216ENST00000569122 ATP5OP48047 213 aa8.14□□□□□ -1.11
SMG1-216ENST00000569122 CSE1LP55060 971 aaKnown RBP8.14□□□□□ -1.11
SMG1-216ENST00000569122 ABATP80404 500 aa8.14□□□□□ -1.11
SMG1-216ENST00000569122 GRB7Q14451 532 aa8.14□□□□□ -1.11
SMG1-216ENST00000569122 USP10Q14694 798 aaKnown RBP8.14□□□□□ -1.11
SMG1-216ENST00000569122 PCBP2Q15366 365 aaKnown RBP eCLIP8.14□□□□□ -1.11
SMG1-216ENST00000569122 STX1AQ16623 288 aa8.14□□□□□ -1.11
SMG1-216ENST00000569122 SFT2D3Q587I9 215 aa8.14□□□□□ -1.11
SMG1-216ENST00000569122 KAZNQ674X7 775 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms