RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 VCX3BQ9H321 246 aa12.23□□□□□ -0.45
NSMCE1-208ENST00000565070 OSGEPL1Q9H4B0 414 aa12.23□□□□□ -0.45
NSMCE1-208ENST00000565070 IL1RL2Q9HB29 575 aa12.23□□□□□ -0.45
NSMCE1-208ENST00000565070 C1orf109Q9NX04 203 aa12.23□□□□□ -0.45
NSMCE1-208ENST00000565070 CMTM6Q9NX76 183 aa12.23□□□□□ -0.45
NSMCE1-208ENST00000565070 STOX2Q9P2F5 926 aaPredicted RBP12.23□□□□□ -0.45
NSMCE1-208ENST00000565070 FAM8A1Q9UBU6 413 aa12.23□□□□□ -0.45
NSMCE1-208ENST00000565070 LRCH1Q9Y2L9 728 aa12.23□□□□□ -0.45
NSMCE1-208ENST00000565070 SNX11Q9Y5W9 270 aa12.23□□□□□ -0.45
NSMCE1-208ENST00000565070 DNAH14Q0VDD8 3507 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 TCRBV3S1A0A5B6 114 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 KHNYNO15037 678 aaKnown RBP12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 RSL1D1O76021 490 aaKnown RBP12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 CER1O95813 267 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 SLC35G4P0C7Q5 338 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 JUPP14923 745 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 PDHA2P29803 388 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 GTF2A1P52655 376 aaPredicted RBP12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 CTBSQ01459 385 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 ZNF33BQ06732 778 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 CAPRIN1Q14444 709 aaKnown RBP12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 NFE2L1Q14494 772 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 IMPG1Q17R60 797 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 SGO1Q5FBB7 561 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 LIPJQ5W064 366 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 AGTRAPQ6RW13 159 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 IZUMO2Q6UXV1 221 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 SPATA24Q86W54 205 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 GKN2Q86XP6 184 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 GLB1L3Q8NCI6 653 aaPredicted RBP12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 OR56A3Q8NH54 315 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 TMEM125Q96AQ2 219 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 FOPNLQ96NB1 174 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 ELF4Q99607 663 aaPredicted RBP12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 ECSITQ9BQ95 431 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 ARRDC1-AS1Q9H2J1 176 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 ELOVL6Q9H5J4 265 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 TM7SF3Q9NS93 570 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 SLC23A2Q9UGH3 650 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 PNMA8BQ9ULN7 279 aaPredicted RBP12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 KCNK6Q9Y257 313 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 TDRD6O60522 2096 aaKnown RBP12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 RALGAPA1Q6GYQ0 2036 aa12.22□□□□□ -0.45
NSMCE1-208ENST00000565070 PRR19A6NJB7 356 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 SEC22BO75396 215 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 ACPPP15309 386 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 VARSP26640 1264 aaKnown RBP12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 PEX2P28328 305 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 NBL1P41271 181 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 ACTR1BP42025 376 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 ATXN3P54252 364 aaPredicted RBP12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 ACTR1AP61163 376 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 YBX1P67809 324 aaKnown RBP12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 BNIP2Q12982 314 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 PTGR1Q14914 329 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 TRIP10Q15642 601 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 CCSMST1Q4G0I0 132 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 ZNF542PQ5EBM4 170 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 PRRT3Q5FWE3 981 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 OGFRL1Q5TC84 451 aaPredicted RBP12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 CACHD1Q5VU97 1274 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 IRAK1BP1Q5VVH5 260 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 WASH2PQ6VEQ5 465 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 THOC6Q86W42 341 aaKnown RBP12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 DHFR2Q86XF0 187 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 KIAA2013Q8IYS2 634 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 SUMF1Q8NBK3 374 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 SELENOMQ8WWX9 145 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 ZUFSPQ96AP4 578 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 PKP4Q99569 1192 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 LRRC61Q9BV99 259 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 KLHL4Q9C0H6 718 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 WASH6PQ9NQA3 447 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 INTS7Q9NVH2 962 aaKnown RBP12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 KLF15Q9UIH9 416 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 RIMS3Q9UJD0 308 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 HCN4Q9Y3Q4 1203 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 CSNK1G3Q9Y6M4 447 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 TMEM131Q92545 1883 aa12.21□□□□□ -0.45
NSMCE1-208ENST00000565070 C15orf38-AP3S2A0A0A6YYH1 394 aa12.21□□□□□ -0.46
NSMCE1-208ENST00000565070 VGLL3A8MV65 326 aa12.21□□□□□ -0.46
NSMCE1-208ENST00000565070 ARHGAP33O14559 1287 aa12.21□□□□□ -0.46
NSMCE1-208ENST00000565070 AQP9O43315 295 aa12.21□□□□□ -0.46
NSMCE1-208ENST00000565070 C1orf105O95561 183 aa12.21□□□□□ -0.46
NSMCE1-208ENST00000565070 SLC16A8O95907 504 aa12.21□□□□□ -0.46
NSMCE1-208ENST00000565070 CAPNS1P04632 268 aa12.21□□□□□ -0.46
NSMCE1-208ENST00000565070 PCSK2P16519 638 aa12.21□□□□□ -0.46
NSMCE1-208ENST00000565070 IMPA1P29218 277 aa12.21□□□□□ -0.46
NSMCE1-208ENST00000565070 HALP42357 657 aa12.21□□□□□ -0.46
NSMCE1-208ENST00000565070 BDKRB1P46663 353 aa12.21□□□□□ -0.46
NSMCE1-208ENST00000565070 BNC1Q01954 994 aa12.21□□□□□ -0.46
NSMCE1-208ENST00000565070 CHIT1Q13231 466 aa12.21□□□□□ -0.46
NSMCE1-208ENST00000565070 E2F2Q14209 437 aa12.21□□□□□ -0.46
NSMCE1-208ENST00000565070 PLA2G2CQ5R387 149 aa12.21□□□□□ -0.46
NSMCE1-208ENST00000565070 LPCAT4Q643R3 524 aa12.21□□□□□ -0.46
NSMCE1-208ENST00000565070 FRG2Q64ET8 278 aa12.21□□□□□ -0.46
NSMCE1-208ENST00000565070 SLC2A7Q6PXP3 512 aa12.21□□□□□ -0.46
NSMCE1-208ENST00000565070 DLEU7Q6UYE1 221 aa12.21□□□□□ -0.46
NSMCE1-208ENST00000565070 ARPINQ7Z6K5 226 aa12.21□□□□□ -0.46
NSMCE1-208ENST00000565070 TAF8Q7Z7C8 310 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms