RNA–Protein interactions for RNA: ENST00000563554.1

AC009163.3-201, humanhuman

TSL 3 BASIC

Gene AC009163.3, Length 852 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009163.3-201ENST00000563554 DKK4Q9UBT3 224 aa13.48□□□□□ -0.25
AC009163.3-201ENST00000563554 MID2Q9UJV3 735 aa13.48□□□□□ -0.25
AC009163.3-201ENST00000563554 PILRAQ9UKJ1 303 aa13.48□□□□□ -0.25
AC009163.3-201ENST00000563554 URB1O60287 2271 aaKnown RBP13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 PLIN3O60664 434 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 CPNE3O75131 537 aaKnown RBP13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 PROCP04070 461 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 EIF2S1P05198 315 aaKnown RBP13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 CTSBP07858 339 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 MYL2P10916 166 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 EPB42P16452 691 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 ZNF28P17035 718 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 EPORP19235 508 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 ATP5F1P24539 256 aaPredicted RBP13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 VARSP26640 1264 aaKnown RBP13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 ARL1P40616 181 aaPredicted RBP13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 PIK3CGP48736 1102 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 NFKB2Q00653 900 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 REEP5Q00765 189 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 PCBP2Q15366 365 aaKnown RBP eCLIP13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 TCTE1Q5JU00 501 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 NXPE4Q6UWF7 544 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 ATG14Q6ZNE5 492 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 GOLGA7Q7Z5G4 137 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 EXOC3L1Q86VI1 746 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 ZFAND4Q86XD8 727 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 SLC22A9Q8IVM8 553 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 BANPQ8N9N5 519 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 TTC29Q8NA56 475 aaPredicted RBP13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 ABHD11Q8NFV4 315 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 TLCD1Q96CP7 247 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 CLIP3Q96DZ5 547 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 PGM2Q96G03 612 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 SH3GL2Q99962 352 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 AIF1LQ9BQI0 150 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 STMN4Q9H169 189 aaPredicted RBP13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 SPNS1Q9H2V7 528 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 ACTR5Q9H9F9 607 aaPredicted RBP13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 WDR70Q9NW82 654 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 ANKRD11Q6UB99 2663 aaPredicted RBP13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 ACACBO00763 2458 aa13.47□□□□□ -0.25
AC009163.3-201ENST00000563554 TRBC2A0A5B9 178 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 TMEM8BA6NDV4 472 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 H0YGG7 62 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 E2F3O00716 465 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 ZNF749O43361 778 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 TLX3O43711 291 aaPredicted RBP13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 TYROBPO43914 113 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 KATNA1O75449 491 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 DLGAP3O95886 979 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 C1GALT1C1LP0DN25 315 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 LIPCP11150 499 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 BCL6P41182 706 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 ARF3P61204 181 aaPredicted RBP13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 GTF2H2Q13888 395 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 SLBPQ14493 270 aaKnown RBP eCLIP13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 XKR6Q5GH73 641 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 PRAMEF17Q5VTA0 474 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 CES4AQ5XG92 561 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 ATG9BQ674R7 924 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 GTF2H2CQ6P1K8 395 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 METTL2BQ6P1Q9 378 aaKnown RBP13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 TLDC1Q6P9B6 456 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 HDXQ7Z353 690 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 ZNF655Q8N720 491 aaPredicted RBP13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 CSNK1A1LQ8N752 337 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 SNIP1Q8TAD8 396 aaKnown RBP13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 RDH11Q8TC12 318 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 FGF11Q92914 225 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 MOCOSQ96EN8 888 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 TMEM237Q96Q45 408 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 SPRTNQ9H040 489 aaPredicted RBP13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 TMBIM4Q9HC24 238 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 STARD5Q9NSY2 213 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 TXLNGQ9NUQ3 528 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 PCTPQ9UKL6 214 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 ACSL6Q9UKU0 697 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 SRPK3Q9UPE1 567 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 TMEM184BQ9Y519 407 aaPredicted RBP13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 PCDHB3Q9Y5E6 796 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 PCDHGA4Q9Y5G9 962 aa13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 TPRP12270 2363 aaKnown RBP13.46□□□□□ -0.25
AC009163.3-201ENST00000563554 FREM2Q5SZK8 3169 aa13.45□□□□□ -0.26
AC009163.3-201ENST00000563554 LOC105369274A0A096LPK9 316 aa13.45□□□□□ -0.26
AC009163.3-201ENST00000563554 LOC102723532A0A0G2JNH3 316 aa13.45□□□□□ -0.26
AC009163.3-201ENST00000563554 TEX51A0A1B0GUA7 166 aa13.45□□□□□ -0.26
AC009163.3-201ENST00000563554 H3BMH7 237 aa13.45□□□□□ -0.26
AC009163.3-201ENST00000563554 OR1F1O43749 312 aa13.45□□□□□ -0.26
AC009163.3-201ENST00000563554 DLX3O60479 287 aa13.45□□□□□ -0.26
AC009163.3-201ENST00000563554 SRPX2O60687 465 aaPredicted RBP13.45□□□□□ -0.26
AC009163.3-201ENST00000563554 STATHP02808 62 aa13.45□□□□□ -0.26
AC009163.3-201ENST00000563554 NTRK1P04629 796 aa13.45□□□□□ -0.26
AC009163.3-201ENST00000563554 RPS17P08708 135 aaKnown RBP13.45□□□□□ -0.26
AC009163.3-201ENST00000563554 HBQ1P09105 142 aa13.45□□□□□ -0.26
AC009163.3-201ENST00000563554 SLC35G6P0C7Q6 338 aa13.45□□□□□ -0.26
AC009163.3-201ENST00000563554 CXCR2P25025 360 aa13.45□□□□□ -0.26
AC009163.3-201ENST00000563554 HERVK_113P63132 956 aa13.45□□□□□ -0.26
AC009163.3-201ENST00000563554 SNRPNP63162 240 aaKnown RBP13.45□□□□□ -0.26
AC009163.3-201ENST00000563554 IRF8Q02556 426 aa13.45□□□□□ -0.26
AC009163.3-201ENST00000563554 RELAQ04206 551 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms