RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 MANEAQ5SRI9 462 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 CATSPEREQ5SY80 951 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 PRAMEF9Q5VWM5 478 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 ZNF385CQ66K41 422 aaPredicted RBP9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 ATG9BQ674R7 924 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 FRMPD2BQ6IN97 320 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 RHBDD2Q6NTF9 364 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 NXPE4Q6UWF7 544 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 TIPARPQ7Z3E1 657 aaKnown RBP9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 ZFAND4Q86XD8 727 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 TMEM126BQ8IUX1 230 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 NLGN4XQ8N0W4 816 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 ARHGEF39Q8N4T4 335 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 ESX1Q8N693 406 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 BANPQ8N9N5 519 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 SLC38A9Q8NBW4 561 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 NLGN4YQ8NFZ3 816 aaPredicted RBP9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 N4BP2L2Q92802 583 aaPredicted RBP9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 ESAMQ96AP7 390 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 ALKBH8Q96BT7 664 aaKnown RBP9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 PGM2Q96G03 612 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 SEC16BQ96JE7 1060 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 DPH2Q9BQC3 489 aaPredicted RBP9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 SELENOSQ9BQE4 189 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 ULBP3Q9BZM4 244 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 SPRTNQ9H040 489 aaPredicted RBP9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 SYNPO2LQ9H987 977 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 SENP1Q9P0U3 644 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 EMCNQ9ULC0 261 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 SRPK3Q9UPE1 567 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 ASB1Q9Y576 335 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 PCDHGA4Q9Y5G9 962 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 LOC105369274A0A096LPK9 316 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 LOC102723532A0A0G2JNH3 316 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 A0A0J9YVX5 310 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 FOXO6A8MYZ6 492 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 H0YGG7 62 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 TERTO14746 1132 aaKnown RBP9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 ZSCAN9O15535 394 aaPredicted RBP9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 ZNF749O43361 778 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 LCMT2O60294 686 aaKnown RBP9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 RAD1O60671 282 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 UGDHO60701 494 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 CPNE3O75131 537 aaKnown RBP9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 SMIM24O75264 130 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 H2AFYO75367 372 aaKnown RBP9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 KIAA0754O94854 1291 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 PROCP04070 461 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 CTSBP07858 339 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 GFAPP14136 432 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 H2AFXP16104 143 aaPredicted RBP9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 EPB42P16452 691 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 TAC1P20366 129 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 CXCR2P25025 360 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 GSTM2P28161 218 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 AHRP35869 848 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 PIK3CGP48736 1102 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 AGTR2P50052 363 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 ARF3P61204 181 aaPredicted RBP9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 REEP5Q00765 189 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 CLN3Q13286 438 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 LAPTM5Q13571 262 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 GRM7Q14831 915 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 PDK4Q16654 411 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 DEFB110Q30KQ9 67 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 GARNL3Q5VVW2 1013 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 C6orf15Q6UXA7 325 aaPredicted RBP9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 SLC22A9Q8IVM8 553 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 DSELQ8IZU8 1212 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 OR4N4Q8N0Y3 316 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 MFSD9Q8NBP5 474 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 RDH11Q8TC12 318 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 PROKR1Q8TCW9 393 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 EXT2Q93063 718 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 CCDC126Q96EE4 140 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 SCYL1Q96KG9 808 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 PKNOX2Q96KN3 472 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 AIF1LQ9BQI0 150 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 ACTR5Q9H9F9 607 aaPredicted RBP9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 SSU72Q9NP77 194 aaKnown RBP9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 ABCF3Q9NUQ8 709 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 GEMIN8Q9NWZ8 242 aaKnown RBP9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 CPSF2Q9P2I0 782 aaKnown RBP9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 OPTCQ9UBM4 332 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 ZFP69BQ9UJL9 534 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 PADI1Q9ULC6 663 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 TSC22D4Q9Y3Q8 395 aa9.2□□□□□ -0.94
RABGGTA-221ENST00000561055 ZZEF1O43149 2961 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 CROCCQ5TZA2 2017 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 CELSR3Q9NYQ7 3312 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 A8MT66 165 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 G3V2L1 256 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 MEN1O00255 615 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 COPEO14579 308 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 CLGNO14967 610 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 DSCR3O14972 297 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 RGS16O15492 202 aaPredicted RBP9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 RRP8O43159 456 aaKnown RBP9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 DLX3O60479 287 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 CCNT2O60583 730 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms