RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 PRAP1Q96NZ9 151 aa15.4■□□□□ 0.06
SNX1-213ENST00000561026 FAM167BQ9BTA0 163 aa15.4■□□□□ 0.06
SNX1-213ENST00000561026 CENPEQ02224 2701 aa15.4■□□□□ 0.06
SNX1-213ENST00000561026 IGHV1-45A0A0A0MS14 117 aa15.39■□□□□ 0.05
SNX1-213ENST00000561026 PCDH17O14917 1159 aa15.39■□□□□ 0.05
SNX1-213ENST00000561026 P2RX6O15547 441 aa15.39■□□□□ 0.05
SNX1-213ENST00000561026 SERPINA7P05543 415 aa15.39■□□□□ 0.05
SNX1-213ENST00000561026 HEXBP07686 556 aa15.39■□□□□ 0.05
SNX1-213ENST00000561026 PRR35P0CG20 571 aa15.39■□□□□ 0.05
SNX1-213ENST00000561026 FDXRP22570 491 aa15.39■□□□□ 0.05
SNX1-213ENST00000561026 FNTAP49354 379 aa15.39■□□□□ 0.05
SNX1-213ENST00000561026 PLD3Q8IV08 490 aa15.39■□□□□ 0.05
SNX1-213ENST00000561026 ACTRT1Q8TDG2 376 aa15.39■□□□□ 0.05
SNX1-213ENST00000561026 GRK7Q8WTQ7 553 aa15.39■□□□□ 0.05
SNX1-213ENST00000561026 FAR1Q8WVX9 515 aa15.39■□□□□ 0.05
SNX1-213ENST00000561026 AARSD1Q9BTE6 412 aaKnown RBP15.39■□□□□ 0.05
SNX1-213ENST00000561026 IARS2Q9NSE4 1012 aaKnown RBP15.39■□□□□ 0.05
SNX1-213ENST00000561026 TMEM184CQ9NVA4 438 aa15.39■□□□□ 0.05
SNX1-213ENST00000561026 KCNE1BA0A087WTH5 132 aa15.38■□□□□ 0.05
SNX1-213ENST00000561026 LOC102723996A0A087X1L8 192 aa15.38■□□□□ 0.05
SNX1-213ENST00000561026 HRH2P25021 359 aa15.38■□□□□ 0.05
SNX1-213ENST00000561026 SOX11P35716 441 aa15.38■□□□□ 0.05
SNX1-213ENST00000561026 TIAL1Q01085 375 aaKnown RBP eCLIP15.38■□□□□ 0.05
SNX1-213ENST00000561026 PTK6Q13882 451 aa15.38■□□□□ 0.05
SNX1-213ENST00000561026 NDUFA9Q16795 377 aa15.38■□□□□ 0.05
SNX1-213ENST00000561026 SYT16Q17RD7 645 aa15.38■□□□□ 0.05
SNX1-213ENST00000561026 RNASEH2BQ5TBB1 312 aaKnown RBP15.38■□□□□ 0.05
SNX1-213ENST00000561026 FAAH2Q6GMR7 532 aa15.38■□□□□ 0.05
SNX1-213ENST00000561026 LRRC8EQ6NSJ5 796 aa15.38■□□□□ 0.05
SNX1-213ENST00000561026 UGT3A1Q6NUS8 523 aa15.38■□□□□ 0.05
SNX1-213ENST00000561026 RPUSD3Q6P087 351 aaKnown RBP15.38■□□□□ 0.05
SNX1-213ENST00000561026 RIPOR1Q6ZS17 1223 aa15.38■□□□□ 0.05
SNX1-213ENST00000561026 MAMDC2Q7Z304 686 aaPredicted RBP15.38■□□□□ 0.05
SNX1-213ENST00000561026 C2CD4AQ8NCU7 369 aaPredicted RBP15.38■□□□□ 0.05
SNX1-213ENST00000561026 MCOLN3Q8TDD5 553 aa15.38■□□□□ 0.05
SNX1-213ENST00000561026 BRIX1Q8TDN6 353 aaKnown RBP15.38■□□□□ 0.05
SNX1-213ENST00000561026 OSBPL9Q96SU4 736 aa15.38■□□□□ 0.05
SNX1-213ENST00000561026 CCDC177Q9NQR7 707 aaPredicted RBP15.38■□□□□ 0.05
SNX1-213ENST00000561026 PTGFRNQ9P2B2 879 aa15.38■□□□□ 0.05
SNX1-213ENST00000561026 TRMT6Q9UJA5 497 aaKnown RBP15.38■□□□□ 0.05
SNX1-213ENST00000561026 MKL2Q9ULH7 1088 aa15.38■□□□□ 0.05
SNX1-213ENST00000561026 MRPS2Q9Y399 296 aaKnown RBP15.38■□□□□ 0.05
SNX1-213ENST00000561026 GOLGA6L10A0A0M3HER8 536 aa15.37■□□□□ 0.05
SNX1-213ENST00000561026 DYTNA2CJ06 578 aa15.37■□□□□ 0.05
SNX1-213ENST00000561026 E2F3O00716 465 aa15.37■□□□□ 0.05
SNX1-213ENST00000561026 BMP10O95393 424 aa15.37■□□□□ 0.05
SNX1-213ENST00000561026 CLDN1O95832 211 aa15.37■□□□□ 0.05
SNX1-213ENST00000561026 EDN3P14138 238 aa15.37■□□□□ 0.05
SNX1-213ENST00000561026 PGAM1P18669 254 aa15.37■□□□□ 0.05
SNX1-213ENST00000561026 SNRPNP63162 240 aaKnown RBP15.37■□□□□ 0.05
SNX1-213ENST00000561026 ARG2P78540 354 aa15.37■□□□□ 0.05
SNX1-213ENST00000561026 MAT1AQ00266 395 aaKnown RBP15.37■□□□□ 0.05
SNX1-213ENST00000561026 EEF1A2Q05639 463 aaKnown RBP15.37■□□□□ 0.05
SNX1-213ENST00000561026 CRYMQ14894 314 aa15.37■□□□□ 0.05
SNX1-213ENST00000561026 TMEM205Q6UW68 189 aa15.37■□□□□ 0.05
SNX1-213ENST00000561026 VN1R4Q7Z5H5 301 aa15.37■□□□□ 0.05
SNX1-213ENST00000561026 ZC3H7AQ8IWR0 971 aaKnown RBP15.37■□□□□ 0.05
SNX1-213ENST00000561026 OR1N1Q8NGS0 311 aa15.37■□□□□ 0.05
SNX1-213ENST00000561026 EEF1AKMT1Q8WVE0 214 aa15.37■□□□□ 0.05
SNX1-213ENST00000561026 CCDC138Q96M89 665 aa15.37■□□□□ 0.05
SNX1-213ENST00000561026 NDNQ99608 321 aa15.37■□□□□ 0.05
SNX1-213ENST00000561026 ZNF700Q9H0M5 742 aa15.37■□□□□ 0.05
SNX1-213ENST00000561026 PCBD2Q9H0N5 130 aa15.37■□□□□ 0.05
SNX1-213ENST00000561026 RIC8BQ9NVN3 520 aa15.37■□□□□ 0.05
SNX1-213ENST00000561026 TAS2R13Q9NYV9 303 aa15.37■□□□□ 0.05
SNX1-213ENST00000561026 ADAMTS6Q9UKP5 1117 aa15.37■□□□□ 0.05
SNX1-213ENST00000561026 PDE10AQ9Y233 779 aa15.37■□□□□ 0.05
SNX1-213ENST00000561026 H0YIG0 161 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 C8GP07360 202 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 GABRB3P28472 473 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 AVPR1BP47901 424 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 RGS4P49798 205 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 EFNA3P52797 238 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 RPS15AP62244 130 aaKnown RBP15.36■□□□□ 0.05
SNX1-213ENST00000561026 TBPL1P62380 186 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 PPP1R7Q15435 360 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 SLC35F6Q8N357 371 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 SIRT6Q8N6T7 355 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 OR9A4Q8NGU2 314 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 GABPB2Q8TAK5 448 aaPredicted RBP15.36■□□□□ 0.05
SNX1-213ENST00000561026 HAS2Q92819 552 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 THAP11Q96EK4 314 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 PARVBQ9HBI1 364 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 PLA2G3Q9NZ20 509 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 SVILO95425 2214 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 ITPR2Q14571 2701 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 WFS1O76024 890 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 NSA2O95478 260 aaKnown RBP15.36■□□□□ 0.05
SNX1-213ENST00000561026 TTC4O95801 387 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 STATHP02808 62 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 CELA2AP08217 269 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 ICAM2P13598 275 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 TNFSF10P50591 281 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 CSNK1G2P78368 415 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 SP140Q13342 867 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 PCOLCEQ15113 449 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 CRYBG3Q68DQ2 2970 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 PAQR3Q6TCH7 311 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 FAM180AQ6UWF9 173 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 PALM2Q8IXS6 379 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms