RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 AKTIPQ9H8T0 292 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 FZD4Q9ULV1 537 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 TEX264Q9Y6I9 313 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 PSMD9O00233 223 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 AXIN1O15169 862 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 AKAP8O43823 692 aaKnown RBP13.09□□□□□ -0.31
TRAF3-208ENST00000560371 HEXBP07686 556 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 GRIA2P42262 883 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 RAB8AP61006 207 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 LMAN2Q12907 356 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 C6orf52Q5T4I8 152 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 ZNF852Q6ZMS4 543 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 FAM156AQ8NDB6 213 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 MR1Q95460 341 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 HAVCR1Q96D42 359 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 SLC2A6Q9UGQ3 507 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 TELO2Q9Y4R8 837 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 GRXCR2A6NFK2 248 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 ANXA2P2A6NMY6 339 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 LOC730098B7Z3J9 87 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 ANXA2P07355 339 aaKnown RBP13.09□□□□□ -0.31
TRAF3-208ENST00000560371 NIPAL1Q6NVV3 410 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 OR2M4Q96R27 311 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 ZNF717Q9BY31 904 aaPredicted RBP13.09□□□□□ -0.31
TRAF3-208ENST00000560371 EIF2S3P41091 472 aaKnown RBP13.09□□□□□ -0.31
TRAF3-208ENST00000560371 GDF5P43026 501 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 TMEM44Q2T9K0 475 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 C14orf80Q86SX3 495 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 TRIM74Q86UV6 250 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 FITM2Q8N6M3 262 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 STYXL1Q9Y6J8 313 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 PHRF1Q9P1Y6 1649 aaKnown RBP13.09□□□□□ -0.31
TRAF3-208ENST00000560371 C2orf74A8MZ97 194 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 KHNYNO15037 678 aaKnown RBP13.09□□□□□ -0.31
TRAF3-208ENST00000560371 GBAP04062 536 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 HSD11B1P28845 292 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 SDC2P34741 201 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 ELOAQ14241 798 aaKnown RBP13.09□□□□□ -0.31
TRAF3-208ENST00000560371 GANABQ14697 944 aaKnown RBP13.09□□□□□ -0.31
TRAF3-208ENST00000560371 KLHL22Q53GT1 634 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 KCTD8Q6ZWB6 473 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 ADGRD2Q7Z7M1 963 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 SLC2A11Q9BYW1 496 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 PTGES2Q9H7Z7 377 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 TCF7L1Q9HCS4 588 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 FARSBQ9NSD9 589 aaKnown RBP13.09□□□□□ -0.31
TRAF3-208ENST00000560371 SUSD2Q9UGT4 822 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 FAM240BA0A1B0GVZ2 78 aa13.08□□□□□ -0.31
TRAF3-208ENST00000560371 GPR32O75388 356 aa13.08□□□□□ -0.31
TRAF3-208ENST00000560371 KAT7O95251 611 aa13.08□□□□□ -0.31
TRAF3-208ENST00000560371 DHFRP00374 187 aa13.08□□□□□ -0.31
TRAF3-208ENST00000560371 ENGP17813 658 aa13.08□□□□□ -0.31
TRAF3-208ENST00000560371 OXTRP30559 389 aa13.08□□□□□ -0.31
TRAF3-208ENST00000560371 DPY19L3Q6ZPD9 716 aa13.08□□□□□ -0.31
TRAF3-208ENST00000560371 CAND1Q86VP6 1230 aaKnown RBP13.08□□□□□ -0.31
TRAF3-208ENST00000560371 SETD6Q8TBK2 473 aa13.08□□□□□ -0.31
TRAF3-208ENST00000560371 TVP23BQ9NYZ1 205 aa13.08□□□□□ -0.31
TRAF3-208ENST00000560371 RAP2AP10114 183 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 TMEM214Q6NUQ4 689 aaKnown RBP13.08□□□□□ -0.32
TRAF3-208ENST00000560371 TBC1D17Q9HA65 648 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 TRPV5Q9NQA5 729 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 SPIN1Q9Y657 262 aaPredicted RBP13.08□□□□□ -0.32
TRAF3-208ENST00000560371 CRYBG1Q9Y4K1 1723 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 S100A9P06702 114 aaKnown RBP13.08□□□□□ -0.32
TRAF3-208ENST00000560371 STC1P52823 247 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 RNASE12Q5GAN4 147 aaKnown RBP13.08□□□□□ -0.32
TRAF3-208ENST00000560371 OR5K4A6NMS3 321 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 RPS13P62277 151 aaKnown RBP13.08□□□□□ -0.32
TRAF3-208ENST00000560371 BICRALQ6AI39 1079 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 FAM43BQ6ZT52 329 aaPredicted RBP13.08□□□□□ -0.32
TRAF3-208ENST00000560371 UBE2J2Q8N2K1 259 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 GLYATL1Q969I3 302 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 CENPMQ9NSP4 180 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 MAN2B2Q9Y2E5 1009 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 A8MT66 165 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 IL33O95760 270 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 TACSTD2P09758 323 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 CLEC12AQ5QGZ9 265 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 LRRC58Q96CX6 371 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 RETREG1Q9H6L5 497 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 ING4Q9UNL4 249 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 ZNF840PA6NDX5 716 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 CHAF1BQ13112 559 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 KCNJ11Q14654 390 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 PLEKHS1Q5SXH7 462 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 PDSS1Q5T2R2 415 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 CHERPQ8IWX8 916 aaKnown RBP13.08□□□□□ -0.32
TRAF3-208ENST00000560371 GEMIN6Q8WXD5 167 aaKnown RBP13.08□□□□□ -0.32
TRAF3-208ENST00000560371 DHRS1Q96LJ7 313 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 VRTNQ9H8Y1 702 aa13.08□□□□□ -0.32
TRAF3-208ENST00000560371 RGPD1P0DJD0 1748 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 SLC22A2O15244 555 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 VEGFDO43915 354 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 JUNDP17535 347 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 IL12AP29459 219 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 C7orf43Q8WVR3 580 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 PSKH2Q96QS6 385 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 NODALQ96S42 347 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 DERL2Q9GZP9 239 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 ADAMTS10Q9H324 1103 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms