RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 HEPHQ9BQS7 1158 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 DUSP26Q9BV47 211 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 GABARAPL1Q9H0R8 117 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 TRIT1Q9H3H1 467 aaKnown RBP9.7□□□□□ -0.86
LRRC28-216ENST00000559819 TM9SF3Q9HD45 589 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 TBC1D23Q9NUY8 699 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 SPATA6Q9NWH7 488 aaPredicted RBP9.7□□□□□ -0.86
LRRC28-216ENST00000559819 ERVW-1Q9UQF0 538 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 ZNF451Q9Y4E5 1061 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 WNT6Q9Y6F9 365 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 GABRR3A8MPY1 467 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 NPIPB8E9PQR5 432 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 PSIP1O75475 530 aaKnown RBP9.7□□□□□ -0.86
LRRC28-216ENST00000559819 SLCO2B1O94956 709 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 GBAP04062 536 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 NTRK1P04629 796 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 CYP2A6P11509 494 aaPredicted RBP9.7□□□□□ -0.86
LRRC28-216ENST00000559819 CCL5P13501 91 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 IMPA1P29218 277 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 CD6P30203 668 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 HOXA9P31269 272 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 CRYBA2P53672 197 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 POLR2LP62875 67 aaKnown RBP9.7□□□□□ -0.86
LRRC28-216ENST00000559819 NTHL1P78549 312 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 SRSF11Q05519 484 aaKnown RBP9.7□□□□□ -0.86
LRRC28-216ENST00000559819 MOGQ16653 247 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 ZNF829Q3KNS6 432 aaPredicted RBP9.7□□□□□ -0.86
LRRC28-216ENST00000559819 HENMT1Q5T8I9 393 aaKnown RBP9.7□□□□□ -0.86
LRRC28-216ENST00000559819 KDM4DQ6B0I6 523 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 CCDC81Q6ZN84 652 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 MSANTD1Q6ZTZ1 278 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 TRIM74Q86UV6 250 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 FBLIM1Q8WUP2 373 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 IRF7Q92985 503 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 GPN2Q9H9Y4 310 aaPredicted RBP9.7□□□□□ -0.86
LRRC28-216ENST00000559819 TPT1P8Q9HAU6 139 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 SH2B3Q9UQQ2 575 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 RUVBL1Q9Y265 456 aaKnown RBP9.7□□□□□ -0.86
LRRC28-216ENST00000559819 COQ6Q9Y2Z9 468 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 SAMHD1Q9Y3Z3 626 aaKnown RBP9.7□□□□□ -0.86
LRRC28-216ENST00000559819 GMPPBQ9Y5P6 360 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 DENND4CQ5VZ89 1909 aa9.7□□□□□ -0.86
LRRC28-216ENST00000559819 SERTM1A2A2V5 107 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 ZNF99A8MXY4 864 aaPredicted RBP9.69□□□□□ -0.86
LRRC28-216ENST00000559819 WASH3PC4AMC7 463 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 SCAMP2O15127 329 aaKnown RBP9.69□□□□□ -0.86
LRRC28-216ENST00000559819 NDUFS2O75306 463 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 MOSPD3O75425 235 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 SLC16A8O95907 504 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 ACPPP15309 386 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 GPX2P18283 190 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 ITIH1P19827 911 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 TNFRSF1BP20333 461 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 GSSP48637 474 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 METAP1P53582 386 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 RPS13P62277 151 aaKnown RBP9.69□□□□□ -0.86
LRRC28-216ENST00000559819 NPTX1Q15818 432 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.69□□□□□ -0.86
LRRC28-216ENST00000559819 GRHL2Q6ISB3 625 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 C16orf87Q6PH81 154 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 BRAT1Q6PJG6 821 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 ZNF852Q6ZMS4 543 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 TRAM1L1Q8N609 369 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 TTC29Q8NA56 475 aaPredicted RBP9.69□□□□□ -0.86
LRRC28-216ENST00000559819 SMYD1Q8NB12 490 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 DDHD1Q8NEL9 900 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 HUS1BQ8NHY5 278 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 RNF217Q8TC41 542 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 MRGPRX3Q96LB0 322 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 WRAP53Q9BUR4 548 aaKnown RBP9.69□□□□□ -0.86
LRRC28-216ENST00000559819 RAD21L1Q9H4I0 556 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 GPBP1L1Q9HC44 474 aaPredicted RBP9.69□□□□□ -0.86
LRRC28-216ENST00000559819 RASSF1Q9NS23 344 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 DNAAF2Q9NVR5 837 aaKnown RBP9.69□□□□□ -0.86
LRRC28-216ENST00000559819 ENPP5Q9UJA9 477 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 FZD4Q9ULV1 537 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 NAALAD2Q9Y3Q0 740 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 PCDHB11Q9Y5F2 797 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 HIDE1A8MVS5 230 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 SAP18O00422 153 aaKnown RBP9.69□□□□□ -0.86
LRRC28-216ENST00000559819 TOR1BO14657 336 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 NPC1O15118 1278 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 OPN1SWP03999 348 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 ANXA4P09525 319 aaPredicted RBP9.69□□□□□ -0.86
LRRC28-216ENST00000559819 ZNF30P17039 623 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 DNAJA1P31689 397 aaKnown RBP9.69□□□□□ -0.86
LRRC28-216ENST00000559819 GRIN2CQ14957 1233 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 RFX4Q33E94 735 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 ZNF385BQ569K4 471 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 ZC3H12BQ5HYM0 836 aaKnown RBP9.69□□□□□ -0.86
LRRC28-216ENST00000559819 CATSPEREQ5SY80 951 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 TMEM220Q6QAJ8 160 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 Q6ZPB1 254 aaPredicted RBP9.69□□□□□ -0.86
LRRC28-216ENST00000559819 NEK10Q6ZWH5 1172 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 CBLL1Q75N03 491 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 EIF3MQ7L2H7 374 aaKnown RBP9.69□□□□□ -0.86
LRRC28-216ENST00000559819 OTOP2Q7RTS6 562 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 TMPRSS11BQ86T26 416 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 CCDC71Q8IV32 467 aaPredicted RBP9.69□□□□□ -0.86
LRRC28-216ENST00000559819 SYNPOQ8N3V7 929 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms