RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 UBTD2Q8WUN7 234 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 CLIP3Q96DZ5 547 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 LRFN5Q96NI6 719 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 TMEM109Q9BVC6 243 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 SPNS1Q9H2V7 528 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 PELI2Q9HAT8 420 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 LHX9Q9NQ69 397 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 WDR70Q9NW82 654 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 CPSF2Q9P2I0 782 aaKnown RBP19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 KCNE1BA0A087WTH5 132 aa19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 FITM1A5D6W6 292 aa19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 LRRC14BA6NHZ5 514 aa19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 TK2O00142 265 aa19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 MEN1O00255 615 aa19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 CCNT2O60583 730 aaKnown RBP19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 HBQ1P09105 142 aa19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 CCNYL3P0C7X3 344 aa19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 GFAPP14136 432 aa19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 EPORP19235 508 aa19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 BCL6P41182 706 aa19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 STAT5AP42229 794 aa19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 ATP1A2P50993 1020 aa19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 ALDH18A1P54886 795 aaKnown RBP19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 RPS15AP62244 130 aaKnown RBP19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 GRM7Q14831 915 aa19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 SETDB1Q15047 1291 aa19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 PRTGQ2VWP7 1150 aa19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 LCN10Q6JVE6 187 aa19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 RHBDD2Q6NTF9 364 aa19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 FAM199XQ6PEV8 388 aaPredicted RBP19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 DSELQ8IZU8 1212 aa19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 IQCKQ8N0W5 287 aa19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 RIBC1Q8N443 379 aaPredicted RBP19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 SARGQ9BW04 601 aa19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 SLC7A5P2Q9GIP4 190 aa19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 MRPL46Q9H2W6 279 aaKnown RBP19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 GPRC5BQ9NZH0 403 aa19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 DHCR7Q9UBM7 475 aaKnown RBP19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 LGALS13Q9UHV8 139 aa19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 CACNA1BQ00975 2339 aa19.38■□□□□ 0.69
TSPAN3-207ENST00000559494 MED26O95402 600 aa19.37■□□□□ 0.69
TSPAN3-207ENST00000559494 C1GALT1C1LP0DN25 315 aa19.37■□□□□ 0.69
TSPAN3-207ENST00000559494 GNAZP19086 355 aa19.37■□□□□ 0.69
TSPAN3-207ENST00000559494 VARSP26640 1264 aaKnown RBP19.37■□□□□ 0.69
TSPAN3-207ENST00000559494 MANEAQ5SRI9 462 aa19.37■□□□□ 0.69
TSPAN3-207ENST00000559494 ZNF385CQ66K41 422 aaPredicted RBP19.37■□□□□ 0.69
TSPAN3-207ENST00000559494 ZNF517Q6ZMY9 492 aaPredicted RBP19.37■□□□□ 0.69
TSPAN3-207ENST00000559494 LRRC70Q7Z2Q7 622 aa19.37■□□□□ 0.69
TSPAN3-207ENST00000559494 VN1R4Q7Z5H5 301 aa19.37■□□□□ 0.69
TSPAN3-207ENST00000559494 TMPRSS11BQ86T26 416 aa19.37■□□□□ 0.69
TSPAN3-207ENST00000559494 LCA5Q86VQ0 697 aa19.37■□□□□ 0.69
TSPAN3-207ENST00000559494 SNX31Q8N9S9 440 aa19.37■□□□□ 0.69
TSPAN3-207ENST00000559494 HNRNPLLQ8WVV9 542 aaKnown RBP19.37■□□□□ 0.69
TSPAN3-207ENST00000559494 THAP11Q96EK4 314 aa19.37■□□□□ 0.69
TSPAN3-207ENST00000559494 CCNL2Q96S94 520 aaPredicted RBP19.37■□□□□ 0.69
TSPAN3-207ENST00000559494 NDC1Q9BTX1 674 aa19.37■□□□□ 0.69
TSPAN3-207ENST00000559494 CAPS2Q9BXY5 557 aa19.37■□□□□ 0.69
TSPAN3-207ENST00000559494 DCDC2Q9UHG0 476 aa19.37■□□□□ 0.69
TSPAN3-207ENST00000559494 PCDHGA4Q9Y5G9 962 aa19.37■□□□□ 0.69
TSPAN3-207ENST00000559494 TRBC2A0A5B9 178 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 HYKKA2RU49 373 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 CCDC151A5D8V7 595 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 K7EPI3 171 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 P2RX6O15547 441 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 CTIFO43310 598 aaKnown RBP19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 SIX3O95343 332 aaPredicted RBP19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 STATHP02808 62 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 KLK3P07288 261 aaPredicted RBP19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 GSTA1P08263 222 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 LIFP15018 202 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 WT1P19544 449 aaPredicted RBP19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 F8A1P23610 371 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 GRK3P35626 688 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 ARSFP54793 590 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 PCBP2Q15366 365 aaKnown RBP eCLIP19.36■□□□□ 0.697e-7■■■■■ 27.7
TSPAN3-207ENST00000559494 PDK4Q16654 411 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 HKDC1Q2TB90 917 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 FAM214AQ32MH5 1076 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 C1orf189Q5VU69 101 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 ATG9BQ674R7 924 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 TTLL10Q6ZVT0 673 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 CSNK1A1LQ8N752 337 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 PTGR2Q8N8N7 351 aaPredicted RBP19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 TTC29Q8NA56 475 aaPredicted RBP19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 MFSD9Q8NBP5 474 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 MR1Q95460 341 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 RERGQ96A58 199 aaPredicted RBP19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 TM4SF19Q96DZ7 209 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 PHF21BQ96EK2 531 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 GBP5Q96PP8 586 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 CHST8Q9H2A9 424 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 CUTCQ9NTM9 273 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 OPTCQ9UBM4 332 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 CROTQ9UKG9 612 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 SRPK3Q9UPE1 567 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 CCDC88CQ9P219 2028 aa19.36■□□□□ 0.69
TSPAN3-207ENST00000559494 TERTO14746 1132 aaKnown RBP19.35■□□□□ 0.69
TSPAN3-207ENST00000559494 OR1F1O43749 312 aa19.35■□□□□ 0.69
TSPAN3-207ENST00000559494 ERLIN1O75477 346 aa19.35■□□□□ 0.69
TSPAN3-207ENST00000559494 TCN2P20062 427 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms