RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 HIST1H2AJQ99878 128 aa11.91□□□□□ -0.5
SMAD3-208ENST00000558827 ERP44Q9BS26 406 aa11.91□□□□□ -0.5
SMAD3-208ENST00000558827 H2AFJQ9BTM1 129 aa11.91□□□□□ -0.5
SMAD3-208ENST00000558827 ZNF552Q9H707 407 aaPredicted RBP11.91□□□□□ -0.5
SMAD3-208ENST00000558827 ATP13A2Q9NQ11 1180 aa11.91□□□□□ -0.5
SMAD3-208ENST00000558827 ARL15Q9NXU5 204 aa11.91□□□□□ -0.5
SMAD3-208ENST00000558827 C3orf18Q9UK00 162 aa11.91□□□□□ -0.5
SMAD3-208ENST00000558827 G3BP2Q9UN86 482 aaKnown RBP11.91□□□□□ -0.5
SMAD3-208ENST00000558827 UBR5O95071 2799 aaPredicted RBP11.91□□□□□ -0.5
SMAD3-208ENST00000558827 FAM95CA0A1B0GW59 222 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 VSTM2BA6NLU5 285 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 DPM1O60762 260 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 ONECUT2O95948 504 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 B3GALT4O96024 378 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 ALBP02768 609 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 SERPIND1P05546 499 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 ANXA5P08758 320 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 CD63P08962 238 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 BCL6P41182 706 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 EMP2P54851 167 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 PLTPP55058 493 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 NAA25Q14CX7 972 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 PLEKHN1Q494U1 663 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-208ENST00000558827 SLC6A19Q695T7 634 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 JMJD6Q6NYC1 403 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-208ENST00000558827 VN1R4Q7Z5H5 301 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 ZC3HC1Q86WB0 502 aaKnown RBP11.9□□□□□ -0.5
SMAD3-208ENST00000558827 C17orf64Q86WR6 236 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 CEP97Q8IW35 865 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 Q8NA96 180 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 KCT2Q8NC54 265 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 OR11G2Q8NGC1 345 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 CPT1CQ8TCG5 803 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 PYROXD1Q8WU10 500 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 ANKRD49Q8WVL7 239 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 MIB2Q96AX9 1013 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 LRRC39Q96DD0 335 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 C19orf60Q96EN9 201 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 TSNARE1Q96NA8 513 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 IP6K3Q96PC2 410 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 WDR54Q9H977 334 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 CAB39LQ9H9S4 337 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 ZNF160Q9HCG1 818 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 SLAMF7Q9NQ25 335 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 TMEM184CQ9NVA4 438 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 HCN3Q9P1Z3 774 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 ANKMY1Q9P2S6 941 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 RNF14Q9UBS8 474 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 ZNF282Q9UDV7 671 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-208ENST00000558827 MTO1Q9Y2Z2 717 aaKnown RBP11.9□□□□□ -0.5
SMAD3-208ENST00000558827 CSAG2Q9Y5P2 127 aa11.9□□□□□ -0.5
SMAD3-208ENST00000558827 ASH1LQ9NR48 2969 aaKnown RBP11.9□□□□□ -0.5
SMAD3-208ENST00000558827 PABPN1LA6NDY0 278 aaKnown RBP11.89□□□□□ -0.51
SMAD3-208ENST00000558827 FAM187AA6NFU0 413 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 ZNF860A6NHJ4 632 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 E7ESA3 106 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 SGK494L7N484 410 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 EIF3FO00303 357 aaPredicted RBP11.89□□□□□ -0.51
SMAD3-208ENST00000558827 SLC16A5O15375 505 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 HEXBP07686 556 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 CELA2AP08217 269 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 EZRP15311 586 aaKnown RBP11.89□□□□□ -0.51
SMAD3-208ENST00000558827 NPPBP16860 134 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 IL1RNP18510 177 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 GNLYP22749 145 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 ETF1P62495 437 aaKnown RBP11.89□□□□□ -0.51
SMAD3-208ENST00000558827 SLC7A5Q01650 507 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 Q0VFX4 171 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 CALCOCO2Q13137 446 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 MYBPC3Q14896 1274 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 CATSPEREQ5SY80 951 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 MFSD4BQ5TF39 518 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 VWA5B1Q5TIE3 1220 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 CAPN13Q6MZZ7 669 aaPredicted RBP11.89□□□□□ -0.51
SMAD3-208ENST00000558827 LRRC8EQ6NSJ5 796 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 PRMT9Q6P2P2 845 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 LINC00696Q6ZRV3 163 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 SLC26A11Q86WA9 606 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 CISD2Q8N5K1 135 aaKnown RBP11.89□□□□□ -0.51
SMAD3-208ENST00000558827 EFCAB3Q8N7B9 438 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 AMER3Q8N944 861 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 ZNF740Q8NDX6 193 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 MOCOSQ96EN8 888 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 THOC3Q96J01 351 aaKnown RBP11.89□□□□□ -0.51
SMAD3-208ENST00000558827 OR4K3Q96R72 315 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 SMAD5Q99717 465 aaKnown RBP11.89□□□□□ -0.51
SMAD3-208ENST00000558827 TRIM54Q9BYV2 358 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 SLC26A1Q9H2B4 701 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 SPNS1Q9H2V7 528 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 MOCS1Q9NZB8 636 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 GRHL1Q9NZI5 618 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 CDC14AQ9UNH5 594 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 ESPL1Q14674 2120 aa11.89□□□□□ -0.51
SMAD3-208ENST00000558827 SHANK1Q9Y566 2161 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 IGHV3-20A0A0C4DH32 117 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 CTAGE15A4D2H0 777 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 NCF1BA6NI72 391 aaPredicted RBP11.88□□□□□ -0.51
SMAD3-208ENST00000558827 NCF1CA8MVU1 366 aaPredicted RBP11.88□□□□□ -0.51
SMAD3-208ENST00000558827 IDSB3KWA1 339 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 MAP2K7O14733 419 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms