RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 YIPF3Q9GZM5 350 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 POT1Q9NUX5 634 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 UTP6Q9NYH9 597 aaKnown RBP9.97□□□□□ -0.81
TPM1-212ENST00000558347 CRYL1Q9Y2S2 319 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 PCDHGA3Q9Y5H0 932 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 MN1Q10571 1320 aaPredicted RBP9.96□□□□□ -0.82
TPM1-212ENST00000558347 UBA6A0AVT1 1052 aaPredicted RBP9.96□□□□□ -0.82
TPM1-212ENST00000558347 B4E171 279 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.96□□□□□ -0.82
TPM1-212ENST00000558347 H3BMM5 538 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 H3BNX3 289 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 ERVH48-1M5A8F1 160 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 TK2O00142 265 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 PRMT5O14744 637 aaPredicted RBP9.96□□□□□ -0.82
TPM1-212ENST00000558347 SGTAO43765 313 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 SMIM24O75264 130 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 C1QL1O75973 258 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 PDE5AO76074 875 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 CHRNGP07510 517 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 PKMP14618 531 aaKnown RBP9.96□□□□□ -0.82
TPM1-212ENST00000558347 VCLP18206 1134 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 WT1P19544 449 aaPredicted RBP9.96□□□□□ -0.82
TPM1-212ENST00000558347 MSH3P20585 1137 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 ATP5F1P24539 256 aaPredicted RBP9.96□□□□□ -0.82
TPM1-212ENST00000558347 CD82P27701 267 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 PBLDP30039 288 aaPredicted RBP9.96□□□□□ -0.82
TPM1-212ENST00000558347 TSPAN7P41732 249 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 SLC12A2P55011 1212 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 CDKN2DP55273 166 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 TAS2R39P59534 338 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 RHDQ02161 417 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 MED21Q13503 144 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 GPR18Q14330 331 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 MAPRE2Q15555 327 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 ANKS6Q68DC2 871 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 SNX32Q86XE0 403 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 HPS6Q86YV9 775 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 CEP97Q8IW35 865 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 ST13P4Q8IZP2 240 aaPredicted RBP9.96□□□□□ -0.82
TPM1-212ENST00000558347 DSELQ8IZU8 1212 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 HEXDCQ8WVB3 486 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 PYDC1Q8WXC3 89 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 TTC9Q92623 222 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 RSC1A1Q92681 617 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 KCNJ9Q92806 393 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 CXorf40BQ96DE9 158 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 NDNQ99608 321 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 COPS8Q99627 209 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 OLFM1Q99784 485 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 CENPKQ9BS16 269 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 CCDC68Q9H2F9 335 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 EPB41L1Q9H4G0 881 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 ZBTB26Q9HCK0 441 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 SLC39A1Q9NY26 324 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 CPSF2Q9P2I0 782 aaKnown RBP9.96□□□□□ -0.82
TPM1-212ENST00000558347 ADAMTS6Q9UKP5 1117 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 MED16Q9Y2X0 877 aa9.96□□□□□ -0.82
TPM1-212ENST00000558347 LOC100653049A0A140TA62 436 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 EIF4E1BA6NMX2 242 aaKnown RBP9.95□□□□□ -0.82
TPM1-212ENST00000558347 STMND1H3BQB6 276 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 CAPN5O15484 640 aaPredicted RBP9.95□□□□□ -0.82
TPM1-212ENST00000558347 PHGDHO43175 533 aaKnown RBP9.95□□□□□ -0.82
TPM1-212ENST00000558347 OR1I1O60431 355 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 DLX3O60479 287 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 KCNJ13O60928 360 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 KRT34O76011 436 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 UBXN7O94888 489 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 C9P02748 559 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 FMO4P31512 558 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 GMPRP36959 345 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 NSG1P42857 185 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 NUDT2P50583 147 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 NAGLUP54802 743 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 SH3BGRP55822 239 aaPredicted RBP9.95□□□□□ -0.82
TPM1-212ENST00000558347 TIAL1Q01085 375 aaKnown RBP eCLIP9.95□□□□□ -0.829e-7■■■□□ 18.9
TPM1-212ENST00000558347 GALNT1Q10472 559 aaPredicted RBP9.95□□□□□ -0.82
TPM1-212ENST00000558347 RPE65Q16518 533 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 PIGGQ5H8A4 983 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 CTSL3PQ5NE16 218 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 MANEAQ5SRI9 462 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 RNF111Q6ZNA4 994 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 PQLC1Q8N2U9 271 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 ICA1LQ8NDH6 482 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 UBXN10Q96LJ8 280 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 TGM7Q96PF1 710 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 CTRCQ99895 268 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 DDA1Q9BW61 102 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 Q9H521 79 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 EFCAB1Q9HAE3 211 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 EML4Q9HC35 981 aaKnown RBP9.95□□□□□ -0.82
TPM1-212ENST00000558347 APMAPQ9HDC9 416 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 TAS2R13Q9NYV9 303 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 XPR1Q9UBH6 696 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 ZDHHC2Q9UIJ5 367 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 GNPTGQ9UJJ9 305 aa9.95□□□□□ -0.82
TPM1-212ENST00000558347 DNMT3AQ9Y6K1 912 aaPredicted RBP9.95□□□□□ -0.82
TPM1-212ENST00000558347 BOD1L1Q8NFC6 3051 aa9.94□□□□□ -0.82
TPM1-212ENST00000558347 CCDC189A1A4V9 331 aa9.94□□□□□ -0.82
TPM1-212ENST00000558347 MGAT4DA6NG13 374 aa9.94□□□□□ -0.82
TPM1-212ENST00000558347 VPS26AO75436 327 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms