RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 FAM9BQ8IZU0 186 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 C1orf131Q8NDD1 294 aaKnown RBP3.38□□□□□ -1.87
VRK1-207ENST00000557352 DHX58Q96C10 678 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 MPP4Q96JB8 637 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 AGAP4Q96P64 663 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 RPP25Q9BUL9 199 aaKnown RBP3.38□□□□□ -1.87
VRK1-207ENST00000557352 MIS12Q9H081 205 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 MED20Q9H944 212 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 TBC1D17Q9HA65 648 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 ARHGEF38Q9NXL2 777 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 WSB2Q9NYS7 404 aaPredicted RBP3.38□□□□□ -1.87
VRK1-207ENST00000557352 POLKQ9UBT6 870 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 ZNF69Q9UC07 566 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 STUB1Q9UNE7 303 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 TRIM17Q9Y577 477 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 NRAPQ86VF7 1730 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 IL16Q14005 1332 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 LAMB4A4D0S4 1761 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 FEZF1A0PJY2 475 aa3.37□□□□□ -1.87
VRK1-207ENST00000557352 ASB14A6NK59 587 aa3.37□□□□□ -1.87
VRK1-207ENST00000557352 C2orf81A6NN90 581 aa3.37□□□□□ -1.87
VRK1-207ENST00000557352 SRRM5B3KS81 715 aa3.37□□□□□ -1.87
VRK1-207ENST00000557352 TSPAN1O60635 241 aa3.37□□□□□ -1.87
VRK1-207ENST00000557352 PTP4A3O75365 173 aa3.37□□□□□ -1.87
VRK1-207ENST00000557352 WDHD1O75717 1129 aaPredicted RBP3.37□□□□□ -1.87
VRK1-207ENST00000557352 SLC9A3P48764 834 aa3.37□□□□□ -1.87
VRK1-207ENST00000557352 DCAF7P61962 342 aa3.37□□□□□ -1.87
VRK1-207ENST00000557352 LMOD3Q0VAK6 560 aa3.37□□□□□ -1.87
VRK1-207ENST00000557352 MTF1Q14872 753 aa3.37□□□□□ -1.87
VRK1-207ENST00000557352 MTHFSDQ2M296 383 aaKnown RBP3.37□□□□□ -1.87
VRK1-207ENST00000557352 TEX38Q6PEX7 206 aa3.37□□□□□ -1.87
VRK1-207ENST00000557352 G2E3Q7L622 706 aa3.37□□□□□ -1.87
VRK1-207ENST00000557352 NUDT13Q86X67 352 aa3.37□□□□□ -1.87
VRK1-207ENST00000557352 CATSPERDQ86XM0 798 aa3.37□□□□□ -1.87
VRK1-207ENST00000557352 ZNF584Q8IVC4 421 aa3.37□□□□□ -1.87
VRK1-207ENST00000557352 PLEKHF1Q96S99 279 aa3.37□□□□□ -1.87
VRK1-207ENST00000557352 OLFM1Q99784 485 aa3.37□□□□□ -1.87
VRK1-207ENST00000557352 FAM207AQ9NSI2 230 aaPredicted RBP3.37□□□□□ -1.87
VRK1-207ENST00000557352 NDE1Q9NXR1 346 aa3.37□□□□□ -1.87
VRK1-207ENST00000557352 GPR83Q9NYM4 423 aa3.37□□□□□ -1.87
VRK1-207ENST00000557352 CSNK1G3Q9Y6M4 447 aa3.37□□□□□ -1.87
VRK1-207ENST00000557352 IGSF1Q8N6C5 1336 aa3.37□□□□□ -1.87
VRK1-207ENST00000557352 PAPPAQ13219 1627 aa3.37□□□□□ -1.87
VRK1-207ENST00000557352 CICQ96RK0 1608 aaPredicted RBP3.37□□□□□ -1.87
VRK1-207ENST00000557352 ZNF831Q5JPB2 1677 aa3.36□□□□□ -1.87
VRK1-207ENST00000557352 OR2A25A4D2G3 310 aa3.36□□□□□ -1.87
VRK1-207ENST00000557352 PI4K2BG5E9Z4 385 aa3.36□□□□□ -1.87
VRK1-207ENST00000557352 IGHEP01854 428 aa3.36□□□□□ -1.87
VRK1-207ENST00000557352 DARSP14868 501 aaKnown RBP3.36□□□□□ -1.87
VRK1-207ENST00000557352 JAK1P23458 1154 aa3.36□□□□□ -1.87
VRK1-207ENST00000557352 HLA-FP30511 346 aa3.36□□□□□ -1.87
VRK1-207ENST00000557352 PSMB10P40306 273 aa3.36□□□□□ -1.87
VRK1-207ENST00000557352 HSPA2P54652 639 aa3.36□□□□□ -1.87
VRK1-207ENST00000557352 EFTUD2Q15029 972 aaKnown RBP eCLIP3.36□□□□□ -1.87
VRK1-207ENST00000557352 RAB41Q5JT25 222 aa3.36□□□□□ -1.87
VRK1-207ENST00000557352 FAAH2Q6GMR7 532 aa3.36□□□□□ -1.87
VRK1-207ENST00000557352 ADIPOR2Q86V24 386 aa3.36□□□□□ -1.87
VRK1-207ENST00000557352 ZPLD1Q8TCW7 415 aa3.36□□□□□ -1.87
VRK1-207ENST00000557352 LRRC15Q8TF66 581 aa3.36□□□□□ -1.87
VRK1-207ENST00000557352 APOBEC4Q8WW27 367 aaKnown RBP3.36□□□□□ -1.87
VRK1-207ENST00000557352 HDAC2Q92769 488 aaKnown RBP3.36□□□□□ -1.87
VRK1-207ENST00000557352 SLC45A3Q96JT2 553 aa3.36□□□□□ -1.87
VRK1-207ENST00000557352 CDRT15Q96T59 188 aa3.36□□□□□ -1.87
VRK1-207ENST00000557352 NKX3-1Q99801 234 aaPredicted RBP3.36□□□□□ -1.87
VRK1-207ENST00000557352 PUS3Q9BZE2 481 aaKnown RBP3.36□□□□□ -1.87
VRK1-207ENST00000557352 MMP27Q9H306 513 aa3.36□□□□□ -1.87
VRK1-207ENST00000557352 GNB4Q9HAV0 340 aa3.36□□□□□ -1.87
VRK1-207ENST00000557352 MAP3K19Q56UN5 1328 aa3.36□□□□□ -1.87
VRK1-207ENST00000557352 LRP6O75581 1613 aa3.36□□□□□ -1.87
VRK1-207ENST00000557352 MRC1P22897 1456 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 SBF2Q86WG5 1849 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 TMEM221A6NGB7 291 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 B4DLN1 442 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 VILLO15195 856 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 TRUB2O95900 331 aaKnown RBP3.35□□□□□ -1.87
VRK1-207ENST00000557352 HPRP00739 348 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 IGKV3-15P01624 115 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 GJA1P17302 382 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 PTPN3P26045 913 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 CDC25CP30307 473 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 CSTF2P33240 577 aaKnown RBP eCLIP3.35□□□□□ -1.87
VRK1-207ENST00000557352 TSFMP43897 325 aaKnown RBP3.35□□□□□ -1.87
VRK1-207ENST00000557352 MRPL12P52815 198 aaKnown RBP3.35□□□□□ -1.87
VRK1-207ENST00000557352 ARF3P61204 181 aaPredicted RBP3.35□□□□□ -1.87
VRK1-207ENST00000557352 ARF1P84077 181 aaKnown RBP3.35□□□□□ -1.87
VRK1-207ENST00000557352 CALD1Q05682 793 aaKnown RBP3.35□□□□□ -1.87
VRK1-207ENST00000557352 CA9Q16790 459 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 SYT14P1Q58G82 188 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 SLC35D3Q5M8T2 416 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 CCDC30Q5VVM6 783 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 KRT79Q5XKE5 535 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 UGT3A1Q6NUS8 523 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 FRRS1Q6ZNA5 592 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 KRTAP5-2Q701N4 177 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 BRINP3Q76B58 766 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 TBC1D1Q86TI0 1168 aaPredicted RBP3.35□□□□□ -1.87
VRK1-207ENST00000557352 SLC47A2Q86VL8 602 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 TMEM173Q86WV6 379 aaPredicted RBP3.35□□□□□ -1.87
VRK1-207ENST00000557352 C11orf45Q8TAV5 145 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 ATP8B4Q8TF62 1192 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms