RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 FCRL1Q96LA6 429 aa17.64■□□□□ 0.41
SDR39U1-220ENST00000556548 ZNF583Q96ND8 569 aa17.64■□□□□ 0.41
SDR39U1-220ENST00000556548 EFCAB11Q9BUY7 163 aa17.64■□□□□ 0.41
SDR39U1-220ENST00000556548 BTBD1Q9H0C5 482 aa17.64■□□□□ 0.41
SDR39U1-220ENST00000556548 RPF2Q9H7B2 306 aaKnown RBP17.64■□□□□ 0.41
SDR39U1-220ENST00000556548 FGF22Q9HCT0 170 aa17.64■□□□□ 0.41
SDR39U1-220ENST00000556548 PREBQ9HCU5 417 aa17.64■□□□□ 0.41
SDR39U1-220ENST00000556548 CUEDC1Q9NWM3 386 aaPredicted RBP17.64■□□□□ 0.41
SDR39U1-220ENST00000556548 SLC17A4Q9Y2C5 497 aa17.64■□□□□ 0.41
SDR39U1-220ENST00000556548 FAM149AA5PLN7 773 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 AQP12BA6NM10 295 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 PDZK1P1A8MUH7 402 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 TXNDC9O14530 226 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 RPN2P04844 631 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 MRPS21P82921 87 aaKnown RBP17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 PYCR3Q53H96 274 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 PAGE2BQ5JRK9 111 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 GCNT7Q6ZNI0 430 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 AQP12AQ8IXF9 295 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 DTWD1Q8N5C7 304 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 OR8J3Q8NGG0 315 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 HMGB4Q8WW32 186 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 EME1Q96AY2 570 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 TESCQ96BS2 214 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 REPS1Q96D71 796 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 REXO4Q9GZR2 422 aaKnown RBP17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 CAAP1Q9H8G2 361 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 PRDM8Q9NQV8 689 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 ACSL5Q9ULC5 683 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 ARHGAP10A1A4S6 786 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 MT-ND1P03886 318 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 HSD3B1P14060 373 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 PRPS1L1P21108 318 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 PSMA4P25789 261 aaKnown RBP17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 HSD3B2P26439 372 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 TEAD1P28347 426 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 HTR1EP28566 365 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 KIR3DL1P43629 444 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 ZNF33BQ06732 778 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 E2F2Q14209 437 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 KRT33BQ14525 404 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 C10orf111Q8N326 155 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 CHTF18Q8WVB6 975 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 C11orf24Q96F05 449 aaPredicted RBP17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 ITCHQ96J02 903 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 SEPHS2Q99611 448 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 MENTQ9BUN1 341 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 EFHD1Q9BUP0 239 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 CARS2Q9HA77 564 aaKnown RBP17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 FBRSQ9HAH7 460 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 DMRT3Q9NQL9 472 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 CCM2LQ9NUG4 571 aaPredicted RBP17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 BTBD3Q9Y2F9 522 aa17.63■□□□□ 0.41
SDR39U1-220ENST00000556548 CROCCQ5TZA2 2017 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 SHISA7A6NL88 538 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 GPR89AB7ZAQ6 455 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 PEX1O43933 1283 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 GPR89BP0CG08 455 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 RANBP1P43487 201 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 TPMTP51580 245 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 CYP4F2P78329 520 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 SKIV2LQ15477 1246 aaKnown RBP17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 NRF1Q16656 503 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 SPATS1Q496A3 300 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 RUNDC3AQ59EK9 446 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 ENPP7Q6UWV6 458 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 PRR23BQ6ZRT6 265 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 ADGRG5Q8IZF4 528 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 FAM9CQ8IZT9 166 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 LINC01555Q8NAE3 123 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 WDR48Q8TAF3 677 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 SETD7Q8WTS6 366 aaKnown RBP17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 FAM3CQ92520 227 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 FIG4Q92562 907 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 WDR34Q96EX3 536 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 DUS3LQ96G46 650 aaKnown RBP17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 RMND5AQ9H871 391 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 TRPV5Q9NQA5 729 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 FZD4Q9ULV1 537 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 INVSQ9Y283 1065 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 USP34Q70CQ2 3546 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 MYO10Q9HD67 2058 aa17.62■□□□□ 0.41
SDR39U1-220ENST00000556548 FEZF1A0PJY2 475 aa17.61■□□□□ 0.41
SDR39U1-220ENST00000556548 RFXANKO14593 260 aa17.61■□□□□ 0.41
SDR39U1-220ENST00000556548 YY2O15391 372 aa17.61■□□□□ 0.41
SDR39U1-220ENST00000556548 PCDH7O60245 1069 aa17.61■□□□□ 0.41
SDR39U1-220ENST00000556548 UBTFL6P0CB48 400 aaPredicted RBP17.61■□□□□ 0.41
SDR39U1-220ENST00000556548 LAMP1P11279 417 aa17.61■□□□□ 0.41
SDR39U1-220ENST00000556548 TPRG1LQ5T0D9 272 aa17.61■□□□□ 0.41
SDR39U1-220ENST00000556548 LCTLQ6UWM7 567 aa17.61■□□□□ 0.41
SDR39U1-220ENST00000556548 TMIGD1Q6UXZ0 262 aa17.61■□□□□ 0.41
SDR39U1-220ENST00000556548 ARMCX6Q7L4S7 300 aa17.61■□□□□ 0.41
SDR39U1-220ENST00000556548 C17orf64Q86WR6 236 aa17.61■□□□□ 0.41
SDR39U1-220ENST00000556548 FAM20CQ8IXL6 584 aa17.61■□□□□ 0.41
SDR39U1-220ENST00000556548 LAS2Q8IYD9 372 aa17.61■□□□□ 0.41
SDR39U1-220ENST00000556548 TBC1D21Q8IYX1 336 aa17.61■□□□□ 0.41
SDR39U1-220ENST00000556548 OR2T12Q8NG77 320 aa17.61■□□□□ 0.41
SDR39U1-220ENST00000556548 BIRC7Q96CA5 298 aa17.61■□□□□ 0.41
SDR39U1-220ENST00000556548 CIB1Q99828 191 aa17.61■□□□□ 0.41
SDR39U1-220ENST00000556548 SORBS1Q9BX66 1292 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms