RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 ACTR8Q9H981 624 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 NMRK1Q9NWW6 199 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 CMTM6Q9NX76 183 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 CLDND1Q9NY35 253 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 ASIC5Q9NY37 505 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 LMCD1Q9NZU5 365 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 SLAMF8Q9P0V8 285 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 ANGPTL2Q9UKU9 493 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 ZFR2Q9UPR6 939 aaKnown RBP7.54□□□□□ -1.2
LINC00641-202ENST00000555688 TMEM98Q9Y2Y6 226 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 PCDHA9Q9Y5H5 950 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 NUMA1Q14980 2115 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 NME4O00746 187 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 ANGPT2O15123 496 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 ADAM23O75077 832 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 BAG2O95816 211 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 SLC16A8O95907 504 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 KRT6AP02538 564 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 CATP04040 527 aaKnown RBP7.54□□□□□ -1.2
LINC00641-202ENST00000555688 KRT6BP04259 564 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 JAK1P23458 1154 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 PRPH2P23942 346 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 ADMP35318 185 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 KRT6CP48668 564 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 SLC7A2P52569 658 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 KCNK10P57789 538 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 TRAP1Q12931 704 aaKnown RBP7.54□□□□□ -1.2
LINC00641-202ENST00000555688 PRKG2Q13237 762 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 NAE1Q13564 534 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 E2F2Q14209 437 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 FLOT2Q14254 428 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 CAPRIN1Q14444 709 aaKnown RBP7.54□□□□□ -1.2
LINC00641-202ENST00000555688 SYTL3Q4VX76 610 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 USP39Q53GS9 565 aaKnown RBP7.54□□□□□ -1.2
LINC00641-202ENST00000555688 ANKRD39Q53RE8 183 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 SGO1Q5FBB7 561 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 TMEM196Q5HYL7 178 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 SAMD4BQ5PRF9 694 aaKnown RBP7.54□□□□□ -1.2
LINC00641-202ENST00000555688 C6orf10Q5SRN2 563 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 SUSD1Q6UWL2 747 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 FAM83HQ6ZRV2 1179 aaPredicted RBP7.54□□□□□ -1.2
LINC00641-202ENST00000555688 MTSS1LQ765P7 747 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 THOC6Q86W42 341 aaKnown RBP7.54□□□□□ -1.2
LINC00641-202ENST00000555688 CACUL1Q86Y37 369 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 TRAPPC5Q8IUR0 188 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 HDDC3Q8N4P3 179 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 DPP10Q8N608 796 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 SMRP1Q8NCR6 262 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 BHLHE22Q8NFJ8 381 aaPredicted RBP7.54□□□□□ -1.2
LINC00641-202ENST00000555688 OR2L2Q8NH16 312 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 ZNF514Q96K75 400 aaPredicted RBP7.54□□□□□ -1.2
LINC00641-202ENST00000555688 GABRG3Q99928 467 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 ZDHHC5Q9C0B5 715 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 MKRN2Q9H000 416 aaKnown RBP7.54□□□□□ -1.2
LINC00641-202ENST00000555688 IL1RL2Q9HB29 575 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 LRTM1Q9HBL6 345 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 MRPL40Q9NQ50 206 aaKnown RBP7.54□□□□□ -1.2
LINC00641-202ENST00000555688 MBNL1Q9NR56 388 aaKnown RBP7.54□□□□□ -1.2
LINC00641-202ENST00000555688 SLC23A2Q9UGH3 650 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 CIDEBQ9UHD4 219 aa7.54□□□□□ -1.2
LINC00641-202ENST00000555688 POLR3HQ9Y535 204 aaPredicted RBP7.54□□□□□ -1.2
LINC00641-202ENST00000555688 A0A1W2PQF6 199 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 MGAT4DA6NG13 374 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 CCDC154A6NI56 674 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 CASQ2O14958 399 aaPredicted RBP7.53□□□□□ -1.2
LINC00641-202ENST00000555688 NVLO15381 856 aaKnown RBP7.53□□□□□ -1.2
LINC00641-202ENST00000555688 UGDHO60701 494 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 RNASEH1O60930 286 aaKnown RBP7.53□□□□□ -1.2
LINC00641-202ENST00000555688 JUPP14923 745 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 TRIM23P36406 574 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 MAPK9P45984 424 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 RPL38P63173 70 aaKnown RBP7.53□□□□□ -1.2
LINC00641-202ENST00000555688 CDK3Q00526 305 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 FOXM1Q08050 763 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 CHIT1Q13231 466 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 NFE2L1Q14494 772 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 PTGR1Q14914 329 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 CYP27C1Q4G0S4 372 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 CMPK2Q5EBM0 449 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 LIPJQ5W064 366 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 CRTC3Q6UUV7 619 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 DLEU7Q6UYE1 221 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 DHDDSQ86SQ9 333 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 HEATR4Q86WZ0 1026 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 LRRC56Q8IYG6 542 aaPredicted RBP7.53□□□□□ -1.2
LINC00641-202ENST00000555688 KIAA2013Q8IYS2 634 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 IL17RCQ8NAC3 791 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 PPFIBP2Q8ND30 876 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 OR2T3Q8NH03 318 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 WDR20Q8TBZ3 569 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 ZNF480Q8WV37 535 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 SELENOMQ8WWX9 145 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 ATL1Q8WXF7 558 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 TMEM125Q96AQ2 219 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 TEX101Q9BY14 249 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 OR52A5Q9H2C5 316 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 DPEP2Q9H4A9 486 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 GID8Q9NWU2 228 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 C1orf109Q9NX04 203 aa7.53□□□□□ -1.2
LINC00641-202ENST00000555688 LEF1Q9UJU2 399 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms