RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 NPEPPSL1A6NEC2 478 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 OR6C65A6NJZ3 312 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 SAC3D1A6NKF1 404 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 H3BQ06 376 aaPredicted RBP3.32□□□□□ -1.88
SEC23A-207ENST00000554615 CXCR6O00574 342 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 ARHGAP33O14559 1287 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 EI24O14681 340 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 FFAR1O14842 300 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 TLL1O43897 1013 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 PEX14O75381 377 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 UPK1BO75841 260 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 ONECUT2O95948 504 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 SCG5P05408 212 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 PDHA1P08559 390 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 TFPTP0C1Z6 253 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 HNRNPLP14866 589 aaKnown RBP eCLIP3.32□□□□□ -1.88
SEC23A-207ENST00000554615 DGKAP23743 735 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 HLA-DMAP28067 261 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 HNF4AP41235 474 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 CDKN2CP42773 168 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 NSG1P42857 185 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 GSSP48637 474 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 SPINT3P49223 89 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 TUFMP49411 452 aaKnown RBP3.32□□□□□ -1.88
SEC23A-207ENST00000554615 PRIM2P49643 509 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 IL2P60568 153 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 COPZ1P61923 177 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 FUT5Q11128 374 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 CRHR2Q13324 411 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 POU6F1Q14863 301 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 NCF4Q15080 339 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 TSNQ15631 228 aaKnown RBP3.32□□□□□ -1.88
SEC23A-207ENST00000554615 PLEKHG6Q3KR16 790 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 DEPDC1Q5TB30 811 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 CLEC6AQ6EIG7 209 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 FRA10AC1Q70Z53 315 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 ERN2Q76MJ5 926 aaKnown RBP3.32□□□□□ -1.88
SEC23A-207ENST00000554615 CEP68Q76N32 757 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 RNF135Q8IUD6 432 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 SPATA2LQ8IUW3 424 aaPredicted RBP3.32□□□□□ -1.88
SEC23A-207ENST00000554615 SCN4BQ8IWT1 228 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 CTAGE3PQ8IX95 158 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 TCTE3Q8IZS6 198 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 LGI4Q8N135 537 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 TTC9BQ8N6N2 239 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 KLHL23Q8NBE8 558 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 OR52B6Q8NGF0 335 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 WFDC5Q8TCV5 224 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 RAET1EQ8TD07 263 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 NETO1Q8TDF5 533 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 TIFAQ96CG3 184 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 MOCOSQ96EN8 888 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 ITCHQ96J02 903 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 GLT1D1Q96MS3 346 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 MUS81Q96NY9 551 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 GPR21Q99679 349 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 SEMA3CQ99985 751 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 DPH2Q9BQC3 489 aaPredicted RBP3.32□□□□□ -1.88
SEC23A-207ENST00000554615 OR52A5Q9H2C5 316 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.32□□□□□ -1.88
SEC23A-207ENST00000554615 ACER3Q9NUN7 267 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 MED17Q9NVC6 651 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 MED9Q9NWA0 146 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 HAO2Q9NYQ3 351 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 SEMA5BQ9P283 1151 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 ZNF223Q9UK11 482 aaPredicted RBP3.32□□□□□ -1.88
SEC23A-207ENST00000554615 TBC1D24Q9ULP9 559 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 SLC27A5Q9Y2P5 690 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 CROCCQ5TZA2 2017 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 TMEM129A0AVI4 362 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 ELOVL7A1L3X0 281 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 IGLON5A6NGN9 336 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 GOLGA8TH3BQL2 631 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 SGK494L7N484 410 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 ETV2O00321 342 aaPredicted RBP3.32□□□□□ -1.88
SEC23A-207ENST00000554615 HGSO14964 777 aaPredicted RBP3.32□□□□□ -1.88
SEC23A-207ENST00000554615 MPZL2O60487 215 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 DOK2O60496 412 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 FMO6PO60774 539 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 GPR37L1O60883 481 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 USP12O75317 370 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 VPS26AO75436 327 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 TIPRLO75663 272 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 CHEK2O96017 543 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 LDLRP01130 860 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 PDYNP01213 254 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 C9P02748 559 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 BMP4P12644 408 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 SRCP12931 536 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 NFKBIAP25963 317 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 SPAM1P38567 509 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 CDKN1CP49918 316 aaPredicted RBP3.32□□□□□ -1.88
SEC23A-207ENST00000554615 AGTR2P50052 363 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 UBE3AQ05086 875 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 CSHL1Q14406 222 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 LLGL1Q15334 1064 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 NPTX1Q15818 432 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 SSX1Q16384 188 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 NDUFA5Q16718 116 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 FUT11Q495W5 492 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms