RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 PPP4R1Q8TF05 950 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 FCRL4Q96PJ5 515 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 CDK15Q96Q40 435 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 OR2A5Q96R48 311 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 PAIP2Q9BPZ3 127 aaKnown RBP17.28■□□□□ 0.36
PSEN1-208ENST00000553719 NT5DC2Q9H857 520 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 PDE7BQ9NP56 450 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 TNFRSF12AQ9NP84 129 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 SOHLH2Q9NX45 425 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 STK38LQ9Y2H1 464 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 RNF11Q9Y3C5 154 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 PCDHGA4Q9Y5G9 962 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 SPTBN2O15020 2390 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 CACNA1AO00555 2505 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 TMEM114B3SHH9 223 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 H0YIV9 168 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 KLF11O14901 512 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 LCMT2O60294 686 aaKnown RBP17.27■□□□□ 0.36
PSEN1-208ENST00000553719 SNNO75324 88 aaPredicted RBP17.27■□□□□ 0.36
PSEN1-208ENST00000553719 CLDN9O95484 217 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 ESRRBO95718 433 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 CHRNGP07510 517 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 JUPP14923 745 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 FOLR1P15328 257 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 GRK2P25098 689 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 BCL6P41182 706 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 HNF4AP41235 474 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 MLLT3P42568 568 aaPredicted RBP17.27■□□□□ 0.36
PSEN1-208ENST00000553719 SCTRP47872 440 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 PKNOX1P55347 436 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 RPS15AP62244 130 aaKnown RBP17.27■□□□□ 0.36
PSEN1-208ENST00000553719 SH3BP2P78314 561 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 RBBP7Q16576 425 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 CFAP157Q5JU67 520 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 FAM219BQ5XKK7 198 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 VN1R4Q7Z5H5 301 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 ADCK2Q7Z695 626 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 ARFGAP2Q8N6H7 521 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 ANKRD53Q8N9V6 530 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 SREK1Q8WXA9 508 aaKnown RBP17.27■□□□□ 0.36
PSEN1-208ENST00000553719 ZNF501Q96CX3 271 aaPredicted RBP17.27■□□□□ 0.36
PSEN1-208ENST00000553719 ZFYVE21Q9BQ24 234 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 AIF1LQ9BQI0 150 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 C20orf27Q9GZN8 174 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 ACTR8Q9H981 624 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 INTS9Q9NV88 658 aaKnown RBP17.27■□□□□ 0.36
PSEN1-208ENST00000553719 OCIAD1Q9NX40 245 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 TRPS1Q9UHF7 1281 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 ZNF490Q9ULM2 529 aaPredicted RBP17.27■□□□□ 0.36
PSEN1-208ENST00000553719 WASF3Q9UPY6 502 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 TSC22D4Q9Y3Q8 395 aa17.27■□□□□ 0.36
PSEN1-208ENST00000553719 FEZF1A0PJY2 475 aa17.26■□□□□ 0.35
PSEN1-208ENST00000553719 B4E171 279 aa17.26■□□□□ 0.35
PSEN1-208ENST00000553719 ITM2AO43736 263 aa17.26■□□□□ 0.35
PSEN1-208ENST00000553719 HYAL3O43820 417 aaPredicted RBP17.26■□□□□ 0.35
PSEN1-208ENST00000553719 CTSBP07858 339 aa17.26■□□□□ 0.35
PSEN1-208ENST00000553719 CSTF2P33240 577 aaKnown RBP eCLIP17.26■□□□□ 0.35
PSEN1-208ENST00000553719 TSPAN7P41732 249 aa17.26■□□□□ 0.35
PSEN1-208ENST00000553719 GCGRP47871 477 aa17.26■□□□□ 0.35
PSEN1-208ENST00000553719 ATP1A2P50993 1020 aa17.26■□□□□ 0.35
PSEN1-208ENST00000553719 BST1Q10588 318 aa17.26■□□□□ 0.35
PSEN1-208ENST00000553719 TARDBPQ13148 414 aaKnown RBP eCLIP17.26■□□□□ 0.35
PSEN1-208ENST00000553719 EIF3IQ13347 325 aaKnown RBP17.26■□□□□ 0.35
PSEN1-208ENST00000553719 LAPTM5Q13571 262 aa17.26■□□□□ 0.35
PSEN1-208ENST00000553719 DEFB110Q30KQ9 67 aa17.26■□□□□ 0.35
PSEN1-208ENST00000553719 ARL13AQ5H913 290 aaPredicted RBP17.26■□□□□ 0.35
PSEN1-208ENST00000553719 FRMPD2BQ6IN97 320 aa17.26■□□□□ 0.35
PSEN1-208ENST00000553719 GPRIN3Q6ZVF9 776 aa17.26■□□□□ 0.35
PSEN1-208ENST00000553719 VN1R5Q7Z5H4 357 aa17.26■□□□□ 0.35
PSEN1-208ENST00000553719 GALNT15Q8N3T1 639 aa17.26■□□□□ 0.35
PSEN1-208ENST00000553719 MFSD9Q8NBP5 474 aa17.26■□□□□ 0.35
PSEN1-208ENST00000553719 MAGEB10Q96LZ2 347 aaPredicted RBP17.26■□□□□ 0.35
PSEN1-208ENST00000553719 SORT1Q99523 831 aa17.26■□□□□ 0.35
PSEN1-208ENST00000553719 STRADBQ9C0K7 418 aa17.26■□□□□ 0.35
PSEN1-208ENST00000553719 HAO1Q9UJM8 370 aa17.26■□□□□ 0.35
PSEN1-208ENST00000553719 CCDC187A0A096LP49 1063 aa17.25■□□□□ 0.35
PSEN1-208ENST00000553719 LOC105369274A0A096LPK9 316 aa17.25■□□□□ 0.35
PSEN1-208ENST00000553719 LOC102723532A0A0G2JNH3 316 aa17.25■□□□□ 0.35
PSEN1-208ENST00000553719 A0A0J9YVX5 310 aa17.25■□□□□ 0.35
PSEN1-208ENST00000553719 PMS2P1A4D2B8 440 aa17.25■□□□□ 0.35
PSEN1-208ENST00000553719 OR4F21O95013 312 aa17.25■□□□□ 0.35
PSEN1-208ENST00000553719 TBX6O95947 436 aaPredicted RBP17.25■□□□□ 0.35
PSEN1-208ENST00000553719 CCL4P13236 92 aa17.25■□□□□ 0.35
PSEN1-208ENST00000553719 CXCR2P25025 360 aa17.25■□□□□ 0.35
PSEN1-208ENST00000553719 AHRP35869 848 aa17.25■□□□□ 0.35
PSEN1-208ENST00000553719 GPR19Q15760 415 aa17.25■□□□□ 0.35
PSEN1-208ENST00000553719 ZC3H12BQ5HYM0 836 aaKnown RBP17.25■□□□□ 0.35
PSEN1-208ENST00000553719 PAGE2BQ5JRK9 111 aa17.25■□□□□ 0.35
PSEN1-208ENST00000553719 TMTC4Q5T4D3 741 aa17.25■□□□□ 0.35
PSEN1-208ENST00000553719 ADNP2Q6IQ32 1131 aa17.25■□□□□ 0.35
PSEN1-208ENST00000553719 TMIGD1Q6UXZ0 262 aa17.25■□□□□ 0.35
PSEN1-208ENST00000553719 RGS9BPQ6ZS82 235 aa17.25■□□□□ 0.35
PSEN1-208ENST00000553719 MILR1Q7Z6M3 343 aa17.25■□□□□ 0.35
PSEN1-208ENST00000553719 CUZD1Q86UP6 607 aa17.25■□□□□ 0.35
PSEN1-208ENST00000553719 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.25■□□□□ 0.35
PSEN1-208ENST00000553719 OR4N4Q8N0Y3 316 aa17.25■□□□□ 0.35
PSEN1-208ENST00000553719 CHCHD4Q8N4Q1 142 aa17.25■□□□□ 0.35
PSEN1-208ENST00000553719 ARHGEF39Q8N4T4 335 aa17.25■□□□□ 0.35
PSEN1-208ENST00000553719 WDR20Q8TBZ3 569 aa17.25■□□□□ 0.35
PSEN1-208ENST00000553719 CKAP2Q8WWK9 683 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms