RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 FBXW10Q5XX13 1052 aa12.98□□□□□ -0.33
PRPF39-204ENST00000553605 ALKBH5Q6P6C2 394 aaKnown RBP12.98□□□□□ -0.33
PRPF39-204ENST00000553605 TTC23LQ6PF05 361 aa12.98□□□□□ -0.33
PRPF39-204ENST00000553605 PACS1Q6VY07 963 aa12.98□□□□□ -0.33
PRPF39-204ENST00000553605 RPS19BP1Q86WX3 136 aaKnown RBP12.98□□□□□ -0.33
PRPF39-204ENST00000553605 LIX1LQ8IVB5 337 aa12.98□□□□□ -0.33
PRPF39-204ENST00000553605 SULF2Q8IWU5 870 aa12.98□□□□□ -0.33
PRPF39-204ENST00000553605 COX4I2Q96KJ9 171 aa12.98□□□□□ -0.33
PRPF39-204ENST00000553605 TTYH2Q9BSA4 534 aa12.98□□□□□ -0.33
PRPF39-204ENST00000553605 DPH7Q9BTV6 452 aa12.98□□□□□ -0.33
PRPF39-204ENST00000553605 GBA3Q9H227 469 aa12.98□□□□□ -0.33
PRPF39-204ENST00000553605 HSD3B7Q9H2F3 369 aa12.98□□□□□ -0.33
PRPF39-204ENST00000553605 CHMP5Q9NZZ3 219 aa12.98□□□□□ -0.33
PRPF39-204ENST00000553605 CBLCQ9ULV8 474 aa12.98□□□□□ -0.33
PRPF39-204ENST00000553605 KLF13Q9Y2Y9 288 aaPredicted RBP12.98□□□□□ -0.33
PRPF39-204ENST00000553605 A0A0G2JNJ9 132 aa12.97□□□□□ -0.33
PRPF39-204ENST00000553605 OR2W5A6NFC9 320 aa12.97□□□□□ -0.33
PRPF39-204ENST00000553605 TPP2P29144 1249 aaPredicted RBP12.97□□□□□ -0.33
PRPF39-204ENST00000553605 CCR7P32248 378 aa12.97□□□□□ -0.33
PRPF39-204ENST00000553605 ACTN3Q08043 901 aaPredicted RBP12.97□□□□□ -0.33
PRPF39-204ENST00000553605 NAA25Q14CX7 972 aa12.97□□□□□ -0.33
PRPF39-204ENST00000553605 PAPD4Q6PIY7 484 aaKnown RBP12.97□□□□□ -0.33
PRPF39-204ENST00000553605 CIARTQ8N365 385 aaPredicted RBP12.97□□□□□ -0.33
PRPF39-204ENST00000553605 ARHGEF39Q8N4T4 335 aa12.97□□□□□ -0.33
PRPF39-204ENST00000553605 OR52N2Q8NGI0 321 aa12.97□□□□□ -0.33
PRPF39-204ENST00000553605 FAM222BQ8WU58 562 aa12.97□□□□□ -0.33
PRPF39-204ENST00000553605 RAD51AP1Q96B01 352 aa12.97□□□□□ -0.33
PRPF39-204ENST00000553605 CDKN2AIPNLQ96HQ2 116 aa12.97□□□□□ -0.33
PRPF39-204ENST00000553605 SARGQ9BW04 601 aa12.97□□□□□ -0.33
PRPF39-204ENST00000553605 TRIM45Q9H8W5 580 aaPredicted RBP12.97□□□□□ -0.33
PRPF39-204ENST00000553605 PNPLA3Q9NST1 481 aa12.97□□□□□ -0.33
PRPF39-204ENST00000553605 NLE1Q9NVX2 485 aaPredicted RBP12.97□□□□□ -0.33
PRPF39-204ENST00000553605 Q9UFV3 132 aa12.97□□□□□ -0.33
PRPF39-204ENST00000553605 AAR2Q9Y312 384 aaKnown RBP12.97□□□□□ -0.33
PRPF39-204ENST00000553605 NPIPA2E9PIF3 369 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 NPIPA3F8WFD2 350 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 CST8O60676 142 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 GLI4P10075 376 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 ACVR2AP27037 513 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 CMPK1P30085 196 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 AVPR1BP47901 424 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 ITGA8P53708 1063 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 DCAF7P61962 342 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 PTK6Q13882 451 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 FAM53BQ14153 422 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 TFDP2Q14188 446 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 DAZAP2Q15038 168 aaPredicted RBP12.96□□□□□ -0.33
PRPF39-204ENST00000553605 PCBP2Q15366 365 aaKnown RBP eCLIP12.96□□□□□ -0.33
PRPF39-204ENST00000553605 SLC25A35Q3KQZ1 300 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 FLYWCH1Q4VC44 716 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 DENND5AQ6IQ26 1287 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 PAOXQ6QHF9 649 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 MFSD7Q6UXD7 560 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 RAB42Q8N4Z0 105 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 SIMC1Q8NDZ2 872 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 HMGCLL1Q8TB92 370 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 ASZ1Q8WWH4 475 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 P3H4Q92791 437 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 LPAR4Q99677 370 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 DEFB127Q9H1M4 99 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 SYNPO2LQ9H987 977 aa12.96□□□□□ -0.33
PRPF39-204ENST00000553605 BEX4Q9NWD9 120 aaPredicted RBP12.96□□□□□ -0.33
PRPF39-204ENST00000553605 A0A0U1RQJ8 604 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 A0A1W2PPV9 198 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 RNF212BA8MTL3 300 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 F8W8V4 182 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 H0YIG0 161 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 H7C1Q1 480 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 SYT5O00445 386 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 TXNDC9O14530 226 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 ARHGEF9O43307 516 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 PEX1O43933 1283 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 PHF2O75151 1096 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 GPC4O75487 556 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 H2AFZP0C0S5 128 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 UQCRC1P31930 480 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 HLCSP50747 726 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 NR0B1P51843 470 aaKnown RBP12.95□□□□□ -0.34
PRPF39-204ENST00000553605 PRPSAP1Q14558 356 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 SFT2D3Q587I9 215 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 KAZNQ674X7 775 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 ITPRIPL1Q6GPH6 555 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 ZNF585AQ6P3V2 769 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 B3GNT6Q6ZMB0 384 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 H2AFVQ71UI9 128 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 WDR53Q7Z5U6 358 aaPredicted RBP12.95□□□□□ -0.34
PRPF39-204ENST00000553605 SHISA5Q8N114 240 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 ZFP62Q8NB50 900 aaPredicted RBP12.95□□□□□ -0.34
PRPF39-204ENST00000553605 OR5M9Q8NGP3 310 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 OR9A4Q8NGU2 314 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 OR51Q1Q8NH59 317 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 RERGQ96A58 199 aaPredicted RBP12.95□□□□□ -0.34
PRPF39-204ENST00000553605 OR2A5Q96R48 311 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 PLCD4Q9BRC7 762 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 ACAT2Q9BWD1 397 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 PLEKHF2Q9H8W4 249 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 ARNT2Q9HBZ2 717 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 FEZ2Q9UHY8 353 aaPredicted RBP12.95□□□□□ -0.34
PRPF39-204ENST00000553605 HIVEP2P31629 2446 aa12.95□□□□□ -0.34
PRPF39-204ENST00000553605 MXRA5Q9NR99 2828 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms