RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 PCYOX1Q9UHG3 505 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 ANAPC5Q9UJX4 755 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 PCDHGB6Q9Y5F9 930 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 MRFAP1Q9Y605 127 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 DUSP10Q9Y6W6 482 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 SETD2Q9BYW2 2564 aaPredicted RBP8.57□□□□□ -1.04
SYNE2-209ENST00000553308 GRID2IPA4D2P6 1211 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 GOLGA6L9A6NEM1 432 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 ERI2A8K979 691 aaKnown RBP8.57□□□□□ -1.04
SYNE2-209ENST00000553308 GABRR3A8MPY1 467 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 ADAM10O14672 748 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 HAT1O14929 419 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 KPNA5O15131 536 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 FANCGO15287 622 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 CD3EAPO15446 510 aaKnown RBP8.57□□□□□ -1.04
SYNE2-209ENST00000553308 ASNA1O43681 348 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 NIPSNAP2O75323 286 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 SUN1O94901 812 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 MATN4O95460 622 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 MLYCDO95822 493 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 PTMAP06454 111 aaKnown RBP8.57□□□□□ -1.04
SYNE2-209ENST00000553308 EZRP15311 586 aaKnown RBP8.57□□□□□ -1.04
SYNE2-209ENST00000553308 CD46P15529 392 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 RPS3P23396 243 aaKnown RBP eCLIP8.57□□□□□ -1.04
SYNE2-209ENST00000553308 TTPAP49638 278 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 NAP1L1P55209 391 aaKnown RBP8.57□□□□□ -1.04
SYNE2-209ENST00000553308 EIF3BP55884 814 aaKnown RBP8.57□□□□□ -1.04
SYNE2-209ENST00000553308 GBX1Q14549 363 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 SPA17Q15506 151 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 MEP1AQ16819 746 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 RNFT1Q5M7Z0 435 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 ICE2Q659A1 982 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 ADCK2Q7Z695 626 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 FGD2Q7Z6J4 655 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.57□□□□□ -1.04
SYNE2-209ENST00000553308 ANKRD37Q7Z713 158 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 PRUNE1Q86TP1 453 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 DOLPP1Q86YN1 238 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 GHDCQ8N2G8 530 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 LRRC57Q8N9N7 239 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 TC2NQ8N9U0 490 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 PPFIBP2Q8ND30 876 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 OR9A1PQ8NGU1 263 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 MAGEC3Q8TD91 643 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 CA5BP1Q8WTZ4 195 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 PHF10Q8WUB8 498 aaKnown RBP8.57□□□□□ -1.04
SYNE2-209ENST00000553308 ATG4AQ8WYN0 398 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 SMPDL3AQ92484 453 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 MRFAP1L1Q96HT8 127 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 CYTH2Q99418 400 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 UTP23Q9BRU9 249 aaKnown RBP8.57□□□□□ -1.04
SYNE2-209ENST00000553308 CHRAC1Q9NRG0 131 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 ABCF3Q9NUQ8 709 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 HCN3Q9P1Z3 774 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 C19orf25Q9UFG5 118 aaPredicted RBP8.57□□□□□ -1.04
SYNE2-209ENST00000553308 PPT2Q9UMR5 302 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 PACSIN2Q9UNF0 486 aaPredicted RBP8.57□□□□□ -1.04
SYNE2-209ENST00000553308 SCN2AQ99250 2005 aa8.57□□□□□ -1.04
SYNE2-209ENST00000553308 SOWAHDA6NJG2 315 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 E7EVH7 732 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 E9PLN8 166 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 MYO1CO00159 1063 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 NDUFS3O75489 264 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 NEURL1O76050 574 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 NADKO95544 446 aaPredicted RBP8.56□□□□□ -1.04
SYNE2-209ENST00000553308 TSPAN12O95859 305 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 PKMP14618 531 aaKnown RBP8.56□□□□□ -1.04
SYNE2-209ENST00000553308 CD1EP15812 388 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 IL1RNP18510 177 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 XCR1P46094 333 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 AVPR1BP47901 424 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 ART1P52961 327 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 CRADDP78560 199 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 OC90Q02509 493 aaPredicted RBP8.56□□□□□ -1.04
SYNE2-209ENST00000553308 PRDX1Q06830 199 aaKnown RBP8.56□□□□□ -1.04
SYNE2-209ENST00000553308 FAM53BQ14153 422 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 NDUFA9Q16795 377 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 ANKRD20A4Q4UJ75 823 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 LRRC6Q86X45 466 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 SPNS2Q8IVW8 549 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 TMEM178AQ8NBL3 297 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 FAM98AQ8NCA5 519 aaKnown RBP8.56□□□□□ -1.04
SYNE2-209ENST00000553308 PPHLN1Q8NEY8 458 aaKnown RBP8.56□□□□□ -1.04
SYNE2-209ENST00000553308 OR51Q1Q8NH59 317 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 PEX13Q92968 403 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 BIRC8Q96P09 236 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 PKP4Q99569 1192 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 MACROD1Q9BQ69 325 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 VKORC1Q9BQB6 163 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 RBCK1Q9BYM8 510 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 NPDC1Q9NQX5 325 aaPredicted RBP8.56□□□□□ -1.04
SYNE2-209ENST00000553308 TREX1Q9NSU2 369 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 GALPQ9UBC7 116 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 ASB1Q9Y576 335 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 HEATR5BQ9P2D3 2071 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 NF1P21359 2839 aa8.56□□□□□ -1.04
SYNE2-209ENST00000553308 H0YIG0 161 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 SGK494L7N484 410 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 SMAPO00193 183 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 TXNDC9O14530 226 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms